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scnpilot_p_inoc_scaffold_1076

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1076_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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288..866
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HY19_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42605.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1076_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

920..2002
DNA (1083bp) protein (361aa)
Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 {ECO:0000313|EMBL:AKH42606.1}; EC=1.14.14.- {ECO:0000313|EMBL:AKH42606.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphapro
vanillate monooxygenase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED41 rbh
vanillate monooxygenase
scnpilot_p_inoc_scaffold_1076_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1975..3621)
DNA (1647bp) protein (549aa)
Alpha-glucosidase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE80_9SPHN rbh
alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:EHJ60303.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium p
scnpilot_p_inoc_scaffold_1076_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3850..6264
DNA (2415bp) protein (805aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7S4_NOVAD rbh
scnpilot_p_inoc_scaffold_1076_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6261..8432
DNA (2172bp) protein (724aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000255|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000255|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000255|HAMA
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GLGB_NOVAD rbh
scnpilot_p_inoc_scaffold_1076_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8445..9707
DNA (1263bp) protein (421aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|SAAS:SAAS00055636}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|SAAS:SAAS00055636};; ADP-glucose pyr
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
glucose-1-phosphate adenylyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B725EA rbh
scnpilot_p_inoc_scaffold_1076_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9707..11155
DNA (1449bp) protein (483aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1630648 species="Bact
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GLGA_NOVAD rbh
scnpilot_p_inoc_scaffold_1076_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11158..12789
DNA (1632bp) protein (544aa)
phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8J8_9SPHN rbh
Phosphoglucomutase {ECO:0000313|EMBL:EGD59027.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium n
scnpilot_p_inoc_scaffold_1076_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12786..14585
DNA (1800bp) protein (600aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
isoamylase (EC:3.2.1.68)
Isoamylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKA1_9SPHN rbh
scnpilot_p_inoc_scaffold_1076_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14604..15323)
DNA (720bp) protein (240aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Glutathione S-transferase-like n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKY5_9SPHN
glutathione S-transferase
scnpilot_p_inoc_scaffold_1076_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15471..16022)
DNA (552bp) protein (184aa)
MarR family n=1 Tax=uncultured organism RepID=T1W717_9ZZZZ
MarR family protein {ECO:0000313|EMBL:AKH44324.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythr
transcriptional regulator, MarR family protein
scnpilot_p_inoc_scaffold_1076_12
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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16193..17083
DNA (891bp) protein (297aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VG95_CAUST
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_1076_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17089..18000
DNA (912bp) protein (304aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EY93_MODMB
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDK01569.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_1076_14
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18031..19089
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L1P5_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1076_15
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19125..20762)
DNA (1638bp) protein (546aa)
ABC transporter permease n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B61498
MFS permease {ECO:0000313|EMBL:EYD75641.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophi
putative MFS permease
scnpilot_p_inoc_scaffold_1076_16
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20810..21787)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ21_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1076_17

Not on your lists

comp(21796..23199)
DNA (1404bp) protein (468aa)
Major Facilitator Superfamily n=1 Tax=uncultured organism RepID=T1W8F2_9ZZZZ rbh
Major Facilitator Superfamily {ECO:0000313|EMBL:AGU10814.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_1076_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23266..25710)
DNA (2445bp) protein (815aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKN7_9SPHN
Colicin I receptor {ECO:0000313|EMBL:AKH44325.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" s
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_1076_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25800..26507)
DNA (708bp) protein (236aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAK65398.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAK65398.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
Glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IME3_9SPHN
glutathione S-transferase
scnpilot_p_inoc_scaffold_1076_20
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26504..27280)
DNA (777bp) protein (259aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B4_NOVAD
glutathione S-transferase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
glutathione S-transferase-like protein
scnpilot_p_inoc_scaffold_1076_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27461..27841)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D22B
Uncharacterized protein {ECO:0000313|EMBL:AKH44327.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1076_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27859..28290)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D22B
Uncharacterized protein {ECO:0000313|EMBL:AKH42145.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
hypothetical protein
Displaying 22 items

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