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scnpilot_p_inoc_scaffold_1142

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1142_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HA14_9SPHN
Peptidase M16 {ECO:0000313|EMBL:KHK92037.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
peptidase M16-like protein
scnpilot_p_inoc_scaffold_1142_2
unknown

Not on your lists

550..1173
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1142_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1175..1975)
DNA (801bp) protein (267aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Novosphingobium RepID=F6IND9_9SPHN
phosphoribosylaminoimidazole-succinocarboxamide synthase
scnpilot_p_inoc_scaffold_1142_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2146..2556
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B562C5
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:GAO56358.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_1142_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2553..3140
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9I5_NOVAD
Histone acetyltransferase HPA2 and related acetyltransferases {ECO:0000313|EMBL:GAO56357.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
hypothetical protein
scnpilot_p_inoc_scaffold_1142_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3137..4024
DNA (888bp) protein (296aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9I4_NOVAD rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:KHS48248.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
scnpilot_p_inoc_scaffold_1142_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4133..6409
DNA (2277bp) protein (759aa)
membrane protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B7674F rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS47008.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
tonB dependent receptor
scnpilot_p_inoc_scaffold_1142_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6506..7006
DNA (501bp) protein (167aa)
msrB2; methionine-R-sulfoxide reductase (EC:1.8.4.-)
Methionine-R-sulfoxide reductase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRB3_9RHIZ
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EJN03163.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacteriu
scnpilot_p_inoc_scaffold_1142_9
unknown

Not on your lists

7031..7258
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1142_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7302..7688)
DNA (387bp) protein (129aa)
Putative transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2D9B2_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EJK79267.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
putative transcriptional regulator
scnpilot_p_inoc_scaffold_1142_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7798..8541
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. LH128 RepID=J8VW09_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJU12228.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
DltE
scnpilot_p_inoc_scaffold_1142_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8545..9381)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QAA4_9RHIZ
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AKH42095.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc
Phosphogluconate dehydrogenase, NAD-binding, putative-like protein
scnpilot_p_inoc_scaffold_1142_13
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9453..9818
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FI65_MYCSM
Uncharacterized protein {ECO:0000313|EMBL:ELQ91095.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1142_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9869..10357)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INP8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68027.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_1142_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10438..10929)
DNA (492bp) protein (164aa)
L-asparaginase 1 {ECO:0000313|EMBL:AKH44116.1}; EC=3.5.1.1 {ECO:0000313|EMBL:AKH44116.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; A
L-asparaginase (EC:3.5.1.1)
L-asparaginase n=2 Tax=Novosphingobium RepID=F6IMI5_9SPHN
scnpilot_p_inoc_scaffold_1142_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11126..13702)
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI0003644DC8
G8 domain protein {ECO:0000313|EMBL:AKH44323.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" so
transmembrane domain-containing protein
scnpilot_p_inoc_scaffold_1142_17
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13944..15419)
DNA (1476bp) protein (492aa)
N-acetylgalactosamine-6-sulfatase (EC:3.1.6.4) rbh
N-acetylgalactosamine-6-sulfatase {ECO:0000313|EMBL:AEG48145.1}; EC=3.1.6.4 {ECO:0000313|EMBL:AEG48145.1};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
N-acetylgalactosamine-6-sulfatase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EWY2_SPHCR rbh
scnpilot_p_inoc_scaffold_1142_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15466..18504)
DNA (3039bp) protein (1013aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJV6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL25478.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_1142_19
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18617..19573
DNA (957bp) protein (319aa)
LysR substrate binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RG70_9PROT
LysR family transcriptional regulator
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN81408.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella
scnpilot_p_inoc_scaffold_1142_20
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20700)
DNA (1089bp) protein (363aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Novosphingobium sp. AP12 RepID=J2P6P1_9SPHN rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EJL22712.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
monooxygenase
scnpilot_p_inoc_scaffold_1142_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20700..20918)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRH4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66040.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_p_inoc_scaffold_1142_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21096..21845)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D95F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25943.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_1142_23
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22127..23317)
DNA (1191bp) protein (397aa)
tRNA nucleotidyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCQ0_ERYLH rbh
tRNA nucleotidyltransferase
tRNA nucleotidyltransferase {ECO:0000313|EMBL:ABC62541.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythroba
scnpilot_p_inoc_scaffold_1142_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23310..23915)
DNA (606bp) protein (202aa)
NUDIX hydrolase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD064C
Putative NUDIX hydrolase {ECO:0000313|EMBL:AKH42029.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altere
NUDIX hydrolase
scnpilot_p_inoc_scaffold_1142_25
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23938..24465)
DNA (528bp) protein (176aa)
Putative acetyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A021_9SPHN
Putative acetyltransferase {ECO:0000313|EMBL:GAD48128.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
acetyltransferase-like
scnpilot_p_inoc_scaffold_1142_26
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24563..25744)
DNA (1182bp) protein (394aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AII9_9SPHN rbh
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EJL32381.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
glucose sorbosone dehydrogenase
scnpilot_p_inoc_scaffold_1142_27
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25809..26378
DNA (570bp) protein (190aa)
Ribonuclease HII {ECO:0000313|EMBL:AKH42025.1}; EC=3.1.26.4 {ECO:0000313|EMBL:AKH42025.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae;
Ribonuclease HII n=1 Tax=Sphingomonas sp. LH128 RepID=J8VK65_9SPHN rbh
rnhB; ribonuclease HII
Displaying 27 items

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