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scnpilot_p_inoc_scaffold_1208

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1208_1
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173..979
DNA (807bp) protein (269aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
arginyl-tRNA-protein transferase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD1147
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
scnpilot_p_inoc_scaffold_1208_2
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1443)
DNA (480bp) protein (160aa)
Lysozyme n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVQ7_9SPHN
glycoside hydrolase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_1208_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1900..3159
DNA (1260bp) protein (420aa)
glycosyl transferase family 1 n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000370ADBC
Glycosyltransferase {ECO:0000313|EMBL:GAO57010.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_1208_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3321..4730)
DNA (1410bp) protein (470aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
glutamine synthetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B43AE2 rbh
scnpilot_p_inoc_scaffold_1208_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4810..5148)
DNA (339bp) protein (113aa)
Nitrogen regulatory P-II family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZM9_9SPHN
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:GAM02254.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
nitrogen regulatory protein P-II
scnpilot_p_inoc_scaffold_1208_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5436..6362)
DNA (927bp) protein (309aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0111
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB12_9SPHN rbh
N-acetyl-gamma-glutamyl-phosphate reductase
scnpilot_p_inoc_scaffold_1208_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6359..6712)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SDS0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42411.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1208_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6790..8184)
DNA (1395bp) protein (465aa)
leucyl aminopeptidase (EC:3.4.11.1)
Peptidase M17 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLE1_9SPHN rbh
Peptidase M17 family protein {ECO:0000313|EMBL:GAD49460.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_1208_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8223..9050
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8B1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49461.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1208_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9118..9954
DNA (837bp) protein (279aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM02_9SPHN rbh
scnpilot_p_inoc_scaffold_1208_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10309..10968)
DNA (660bp) protein (220aa)
Heme exporter protein B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3Y1_9SPHN rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
cytochrome C biogenesis protein CcmB rbh
scnpilot_p_inoc_scaffold_1208_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10965..11546)
DNA (582bp) protein (194aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707, ECO:0000313|EMBL:CCA91668.1};; Heme exporter protein A {ECO:000
Heme exporter protein A n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ42_9SPHN
cytochrome C biogenesis protein CcmA
scnpilot_p_inoc_scaffold_1208_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11600..11890
DNA (291bp) protein (97aa)
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=3 Tax=Acidiphilium RepID=PHS_ACICJ
scnpilot_p_inoc_scaffold_1208_14
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11946..12755)
DNA (810bp) protein (270aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EDL48685.1}; EC=1.1.1.- {ECO:0000313|EMBL:EDL48685.1};; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacter
Short chain dehydrogenase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCB5_9SPHN rbh
short chain dehydrogenase
scnpilot_p_inoc_scaffold_1208_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12831..13448)
DNA (618bp) protein (206aa)
HhH-GPD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B2_NOVAD rbh
HhH-GPD
HhH-GPD {ECO:0000313|EMBL:ABD25561.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivor
scnpilot_p_inoc_scaffold_1208_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13554..13871
DNA (318bp) protein (106aa)
ferredoxin n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD1135
Ferredoxin-6 {ECO:0000313|EMBL:AKH42398.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter
ferredoxin
scnpilot_p_inoc_scaffold_1208_17
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14024..15034
DNA (1011bp) protein (337aa)
Cysteine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JBI1_9SPHN
Cysteine synthase {ECO:0000313|EMBL:EQB19269.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium l
cysteine synthase
scnpilot_p_inoc_scaffold_1208_18
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15073..15426
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WA83_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ29292.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_1208_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15404..16183
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLE8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49470.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1208_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16453..17022
DNA (570bp) protein (190aa)
Protein MraZ n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8C0_9SPHN
Protein MraZ {ECO:0000313|EMBL:GAD49471.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardau
hypothetical protein
scnpilot_p_inoc_scaffold_1208_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17019..17963
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000313|EMBL:AKH42393.1}; EC=2.1.1.199 {ECO:0000313|EMBL:AKH42393.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM10_9SPHN rbh
mraW; S-adenosyl-methyltransferase MraW
scnpilot_p_inoc_scaffold_1208_22
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17963..18496
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3Z0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49473.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1208_23
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18493..20217
DNA (1725bp) protein (575aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan synthase FtsI n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVS3_9SPHN rbh
Peptidoglycan synthase FtsI {ECO:0000313|EMBL:GAD49474.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_p_inoc_scaffold_1208_24
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20214..21677
DNA (1464bp) protein (488aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13) rbh
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000313|EMBL:CCA91680.1};; Meso-A2pm-adding e
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ54_9SPHN rbh
scnpilot_p_inoc_scaffold_1208_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21677..23164
DNA (1488bp) protein (496aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000313|EMBL:AKH42389.1}; EC=6.3.2.10 {ECO:0000313|EMBL:AKH42389.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacter
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8C4_9SPHN rbh
UDP-N-acetylmuramyl pentapeptide synthase
scnpilot_p_inoc_scaffold_1208_26
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23164..24234
DNA (1071bp) protein (357aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM13_9SPHN rbh
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
scnpilot_p_inoc_scaffold_1208_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24231..25073
DNA (843bp) protein (281aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3Z4_9SPHN
UDP-N-acetylmuramoylalanine--D-glutamate ligase
scnpilot_p_inoc_scaffold_1208_28
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25127..25576
DNA (450bp) protein (150aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3Z4_9SPHN
scnpilot_p_inoc_scaffold_1208_29
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25573..26865
DNA (1293bp) protein (431aa)
Cell division protein FtsW n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVS8_9SPHN rbh
Cell division protein FtsW {ECO:0000313|EMBL:GAD49479.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
cell division protein
scnpilot_p_inoc_scaffold_1208_30
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26862..28043
DNA (1182bp) protein (394aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLF5_9SPHN rbh
UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase rbh
Displaying items 1-30 of 44 in total

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