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scnpilot_p_inoc_scaffold_1326

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1326_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1834
DNA (1833bp) protein (611aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ90_9SPHN
Vitamin B12 transporter BtuB {ECO:0000313|EMBL:AKH41524.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrob
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_1326_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2004..2990
DNA (987bp) protein (329aa)
Quinone oxidoreductase 1 {ECO:0000313|EMBL:AKH41523.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AKH41523.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacter
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=C0SUK2_9SPHN rbh
putative oxidoreductase
scnpilot_p_inoc_scaffold_1326_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..4433)
DNA (1350bp) protein (450aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:AKH43151.1}; EC=1.2.1.3 {ECO:0000313|EMBL:AKH43151.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterac
Aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITK5_9SPHN rbh
aldehyde dehydrogenase rbh
scnpilot_p_inoc_scaffold_1326_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..7353)
DNA (2535bp) protein (845aa)
Putative ATP-dependent DNA ligase YkoU {ECO:0000313|EMBL:AKH43776.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AKH43776.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBM4_ERYLH rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1326_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7357..8202)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EC82 rbh
Putative DNA repair protein YkoV {ECO:0000313|EMBL:AKH43775.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1326_6
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8299..9276)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G543_NOVAD rbh
DNA topoisomerase {ECO:0000313|EMBL:KHK91106.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium m
hypothetical protein
scnpilot_p_inoc_scaffold_1326_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9360..9917)
DNA (558bp) protein (186aa)
GCN5-related N-acetyltransferase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q6Y3_METSZ
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCJ05622.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocyst
scnpilot_p_inoc_scaffold_1326_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..10426)
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TR03_TISMK
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFK55191.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrell
scnpilot_p_inoc_scaffold_1326_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10521..11954)
DNA (1434bp) protein (478aa)
GntR family transcriptional regulator (EC:2.6.1.39)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D44A1C rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABA04145.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
scnpilot_p_inoc_scaffold_1326_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12116..13357
DNA (1242bp) protein (414aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
PREDICTED: serine hydroxymethyltransferase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AFD0 rbh
serine hydroxymethyltransferase
scnpilot_p_inoc_scaffold_1326_11
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13350..14087
DNA (738bp) protein (246aa)
PREDICTED: proline synthase co-transcribed bacterial homolog protein-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C15474 rbh
alanine racemase domain protein
Alanine racemase domain protein {ECO:0000313|EMBL:AHI05130.1}; TaxID=765869 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdell
scnpilot_p_inoc_scaffold_1326_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14460..16949)
DNA (2490bp) protein (830aa)
Putative cation transport ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y6P1_9SPHN rbh
Putative cation transport ATPase {ECO:0000313|EMBL:GAD48826.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
ATPase
scnpilot_p_inoc_scaffold_1326_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16985..20224)
DNA (3240bp) protein (1080aa)
cation transporter n=1 Tax=Sphingomonas wittichii RepID=UPI0002D7C465 rbh
Putative heavy metal efflux system protein {ECO:0000313|EMBL:GAD48820.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
heavy metal efflux pump CzcA rbh
scnpilot_p_inoc_scaffold_1326_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20228..21379)
DNA (1152bp) protein (384aa)
hemolysin D n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248985C rbh
Putative heavy metal efflux system protein {ECO:0000313|EMBL:GAD48819.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
secretion protein HlyD
scnpilot_p_inoc_scaffold_1326_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21382..22644)
DNA (1263bp) protein (421aa)
transporter n=2 Tax=Sphingomonas RepID=UPI000248985B rbh
Putative heavy metal efflux system protein {ECO:0000313|EMBL:GAD48818.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
transporter
scnpilot_p_inoc_scaffold_1326_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22710..23030)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000381767E
Uncharacterized protein {ECO:0000313|EMBL:GAD48817.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_1326_17
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23282..23611)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4D9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47921.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
Displaying 17 items

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