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scnpilot_p_inoc_scaffold_1431

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1431_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..258
DNA (258bp) protein (86aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6C0_9SPHN
ahcY; adenosylhomocysteinase
scnpilot_p_inoc_scaffold_1431_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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355..2697
DNA (2343bp) protein (781aa)
Sensor protein DivL {ECO:0000313|EMBL:AKH41764.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH41764.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteracea
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJM2_9SPHN rbh
two-component signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1431_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2694..3137
DNA (444bp) protein (148aa)
ATPase, YjeE family n=1 Tax=Novosphingobium sp. AP12 RepID=J2PKU4_9SPHN
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE {ECO:0000313|EMBL:AKH41763.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alt
ATPase
scnpilot_p_inoc_scaffold_1431_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3134..4117
DNA (984bp) protein (328aa)
Putative phosphotransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ28_9SPHN rbh
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:AKH41762.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;
aminoglycoside phosphotransferase
scnpilot_p_inoc_scaffold_1431_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4114..4830
DNA (717bp) protein (239aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F70A8D rbh
Bifunctional IPC transferase and DIPP synthase {ECO:0000313|EMBL:AKH41761.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythroba
hypothetical protein
scnpilot_p_inoc_scaffold_1431_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4823..7879
DNA (3057bp) protein (1019aa)
Double-strand break repair protein AddB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0V4_9SPHN rbh
Double-strand break repair protein AddB {ECO:0000313|EMBL:GAD48383.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
helicase
scnpilot_p_inoc_scaffold_1431_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7876..11331
DNA (3456bp) protein (1152aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
Double-strand break repair helicase AddA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJL9_9SPHN rbh
ATP-dependent exonuclease V subunit beta rbh
scnpilot_p_inoc_scaffold_1431_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11409..11729
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T8_NOVAD
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromat
scnpilot_p_inoc_scaffold_1431_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12222..13028)
DNA (807bp) protein (269aa)
Inositol monophosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6T9_NOVAD
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:ABD26434.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_1431_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13025..14251)
DNA (1227bp) protein (409aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6U1_NOVAD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
scnpilot_p_inoc_scaffold_1431_11
unknown

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14377..14649
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1431_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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14756..17503
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EI22_9SPHN rbh
Preprotein translocase subunit SecA {ECO:0000313|EMBL:AKH41754.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sou
preprotein translocase subunit SecA rbh
scnpilot_p_inoc_scaffold_1431_13
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17586..18464
DNA (879bp) protein (293aa)
Gluconolactonase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AP24_9SPHN
Gluconolactonase {ECO:0000313|EMBL:EJL34394.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
SMP-30/Gluconolaconase/LRE domain-containing protein
scnpilot_p_inoc_scaffold_1431_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18480..19673
DNA (1194bp) protein (398aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E7H2_CAUCE rbh
Tetracycline resistance protein, class B {ECO:0000313|EMBL:AKH41753.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_1431_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19735..20469
DNA (735bp) protein (245aa)
Putative methyltransferase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVC1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:AKH41750.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1431_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20696..20944)
DNA (249bp) protein (83aa)
Putative inorganic polyphosphate/ATP-NAD kinase {ECO:0000313|EMBL:AKH41749.1}; EC=2.7.1.23 {ECO:0000313|EMBL:AKH41749.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EA8F
Displaying 16 items

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