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scnpilot_p_inoc_scaffold_1574

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1574_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)
Type 11 methyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLZ9_9BURK
Type 11 methyltransferase {ECO:0000313|EMBL:EIK90239.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga s
scnpilot_p_inoc_scaffold_1574_2
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246..1226)
DNA (981bp) protein (327aa)
group 2 family glycosyl transferase (EC:2.-.-.-)
Lipopolysaccharide core biosynthesis glycosyl transferase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C8K5_9SPHN rbh
Lipopolysaccharide core biosynthesis glycosyl transferase {ECO:0000313|EMBL:EIZ79785.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novos
scnpilot_p_inoc_scaffold_1574_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1326..2675)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKU4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51972.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
scnpilot_p_inoc_scaffold_1574_4
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2672..3103)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L4Q0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ79314.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_1574_5
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3194..4411)
DNA (1218bp) protein (406aa)
Glycosyl transferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3M6_9SPHN rbh
Scaffold35, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30080.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
GT1/WbuB-like N-acetyl-L-fucosamine transferase
scnpilot_p_inoc_scaffold_1574_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..5298)
DNA (885bp) protein (295aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CXK8_CAUCE rbh
scnpilot_p_inoc_scaffold_1574_7
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5352..6119)
DNA (768bp) protein (256aa)
Methyltransferase domain family n=2 Tax=Nitrosococcus oceani RepID=B6C238_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA57995.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (
scnpilot_p_inoc_scaffold_1574_8
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6160..7227)
DNA (1068bp) protein (356aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1572751 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002EF8AA0 rbh
GDP-mannose 4,6-dehydratase
scnpilot_p_inoc_scaffold_1574_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7445..8437)
DNA (993bp) protein (331aa)
NAD dependent epimerase/dehydratase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B71BAE rbh
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12837.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
putative NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_1574_10
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8533..9699)
DNA (1167bp) protein (389aa)
Nucleotide sugar dehydrogenase n=1 Tax=Novosphingobium sp. AP12 RepID=J3ANZ5_9SPHN rbh
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EJL34931.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_1574_11
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..10805
DNA (636bp) protein (212aa)
UPI0003CFFDCA related cluster n=1 Tax=unknown RepID=UPI0003CFFDCA
Rep {ECO:0000313|EMBL:ESZ88297.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
repA; Replication protein A
scnpilot_p_inoc_scaffold_1574_12
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11254..11934
DNA (681bp) protein (227aa)
Excalibur n=2 Tax=Sphingopyxis RepID=Q1GWW4_SPHAL
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_p_inoc_scaffold_1574_13
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12020..12343
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BH05_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM68857.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indi
scnpilot_p_inoc_scaffold_1574_14
unknown

Not on your lists

12710..12889
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1574_15
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12921..13526
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKW0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ57927.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_1574_16
unknown

Not on your lists

13723..13947
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1574_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15177..15998)
DNA (822bp) protein (274aa)
Adenine specific DNA methyltransferase, D12 class n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFJ9_9SPHN
DNA methyltransferase
Adenine specific DNA methyltransferase, D12 class {ECO:0000313|EMBL:EHJ59947.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
scnpilot_p_inoc_scaffold_1574_18
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16137..17180)
DNA (1044bp) protein (348aa)
UPI0003CFCEF2 related cluster n=1 Tax=unknown RepID=UPI0003CFCEF2
Presumed portal vertex protein {ECO:0000313|EMBL:ESZ86307.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomo
hypothetical protein
scnpilot_p_inoc_scaffold_1574_19
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17177..18841)
DNA (1665bp) protein (555aa)
terminase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5D3C1 rbh
Terminase {ECO:0000313|EMBL:ESZ86308.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
terminase
Displaying 19 items

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