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scnpilot_p_inoc_scaffold_1809

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1809_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
Formate--tetrahydrofolate ligase {ECO:0000313|EMBL:AKH42053.1}; EC=6.3.4.3 {ECO:0000313|EMBL:AKH42053.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
formate--tetrahydrofolate ligase n=1 Tax=Rhizobium giardinii RepID=UPI00037EA9BC
scnpilot_p_inoc_scaffold_1809_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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888..2288
DNA (1401bp) protein (467aa)
DNA recombination protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCT1_ERYLH rbh
DNA recombination protein
DNA recombination protein {ECO:0000313|EMBL:ABC62510.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobact
scnpilot_p_inoc_scaffold_1809_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2293..3030
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4V7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48151.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1809_4
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3051..3647)
DNA (597bp) protein (199aa)
YceI family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMI0_METSB
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACK52108.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
scnpilot_p_inoc_scaffold_1809_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3760..4185)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YII4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48150.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1809_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4256..5056)
DNA (801bp) protein (267aa)
23S rRNA (Uridine(2479)-2'-O)-methyltransferase {ECO:0000313|EMBL:AKH42050.1}; EC=2.1.1.208 {ECO:0000313|EMBL:AKH42050.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
rRNA methylase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PBC8_9SPHN rbh
rRNA methylase
scnpilot_p_inoc_scaffold_1809_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5113..5391)
DNA (279bp) protein (93aa)
HPr kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3E399
HPrNtr {ECO:0000313|EMBL:KHS48659.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;
HPrNtr
scnpilot_p_inoc_scaffold_1809_8
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5443..5847)
DNA (405bp) protein (135aa)
PTS system fructose subfamily IIA component n=1 Tax=Sphingomonas sp. LH128 RepID=J8VRF0_9SPHN
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:EZP83390.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
PTS fructose transporter subunit IIA
scnpilot_p_inoc_scaffold_1809_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5933..6862)
DNA (930bp) protein (310aa)
UPF0042 nucleotide-binding protein Saro_2904 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Y2904_NOVAD
GlmZ(SRNA)-inactivating NTPase {ECO:0000313|EMBL:AKH42047.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="
hypothetical protein
scnpilot_p_inoc_scaffold_1809_10
unknown

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comp(7482..7796)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1809_11
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7822..8115
DNA (294bp) protein (98aa)
transposase IS298 n=1 Tax=alpha proteobacterium L41A RepID=UPI00036F8CDB
hypothetical protein
Transposase {ECO:0000313|EMBL:KHK90070.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysi
scnpilot_p_inoc_scaffold_1809_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8608..9027)
DNA (420bp) protein (140aa)
HPr kinase/phosphorylase {ECO:0000313|EMBL:AKH42046.1}; EC=2.7.11.- {ECO:0000313|EMBL:AKH42046.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacte
Putative HPr kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YII1_9SPHN
HPr kinase
scnpilot_p_inoc_scaffold_1809_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9024..10571)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRZ2_9SPHN rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1809_14
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10603..11373)
DNA (771bp) protein (257aa)
Two-component response regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCS2_ERYLH rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:ABC62519.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Eryt
scnpilot_p_inoc_scaffold_1809_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11617..13209
DNA (1593bp) protein (531aa)
Phosphoenolpyruvate carboxykinase {ECO:0000313|EMBL:AKH42043.1}; EC=4.1.1.49 {ECO:0000313|EMBL:AKH42043.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Ery
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCS1_ERYLH rbh
scnpilot_p_inoc_scaffold_1809_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13420..13743
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIZ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42041.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1809_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13894..14934)
DNA (1041bp) protein (347aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EA38_9SPHN
diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:EHJ61895.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
scnpilot_p_inoc_scaffold_1809_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15001..16137)
DNA (1137bp) protein (379aa)
Soluble hydrogenase 42 kDa subunit {ECO:0000313|EMBL:AKH42755.1}; EC=1.12.-.- {ECO:0000313|EMBL:AKH42755.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Er
Putative aminotransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILM7_9SPHN rbh
putative aminotransferase
Displaying 18 items

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