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scnpilot_p_inoc_scaffold_1815

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1815_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1081)
DNA (1080bp) protein (360aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000313|EMBL:AKH41806.1}; EC=4.1.1.96 {ECO:0000313|EMBL:AKH41806.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJQ0_9SPHN rbh
carboxynorspermidine decarboxylase
scnpilot_p_inoc_scaffold_1815_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..1441)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0Z1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48428.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
transmembrane signal peptide protein
scnpilot_p_inoc_scaffold_1815_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1522..2733)
DNA (1212bp) protein (404aa)
Putative saccharopine dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZST9_9SPHN rbh
Putative saccharopine dehydrogenase {ECO:0000313|EMBL:GAD48429.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
saccharopine dehydrogenase rbh
scnpilot_p_inoc_scaffold_1815_4
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2796..3758
DNA (963bp) protein (321aa)
threonine dehydratase (EC:4.3.1.19) rbh
Threonine dehydratase n=1 Tax=Sphingomonas sp. LH128 RepID=J8W0N3_9SPHN rbh
Threonine dehydratase {ECO:0000313|EMBL:EJU13838.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_p_inoc_scaffold_1815_5
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3826..4257
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBA7_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC63034.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_1815_6
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4271..4699
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHV2_9SPHN
Membrane protein {ECO:0000313|EMBL:KHK91712.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ma
membrane protein
scnpilot_p_inoc_scaffold_1815_7
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4781..5746)
DNA (966bp) protein (322aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacter
Thioredoxin reductase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBA9_ERYLH rbh
thioredoxin reductase
scnpilot_p_inoc_scaffold_1815_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6112..6399)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EF09_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ60135.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_1815_9
unknown

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comp(6645..7040)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1815_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..8059)
DNA (987bp) protein (329aa)
Putative aminodeoxychorismate lyase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3G1_9SPHN rbh
Putative aminodeoxychorismate lyase {ECO:0000313|EMBL:GAD47521.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
aminodeoxychorismate lyase
scnpilot_p_inoc_scaffold_1815_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8063..9325)
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
3-oxoacyl-ACP synthase (EC:2.3.1.179) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHT7_9SPHN rbh
scnpilot_p_inoc_scaffold_1815_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9424..9660)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0839
Acyl carrier protein {ECO:0000313|EMBL:AKH41854.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altereryth
acpP; acyl carrier protein
scnpilot_p_inoc_scaffold_1815_13
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10036..11154
DNA (1119bp) protein (373aa)
1,2-oxophytodienoate reductase n=1 Tax=Sphingomonas elodea RepID=UPI000263046C rbh
Oxidoreductase {ECO:0000313|EMBL:EIZ80977.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. R
oxidoreductase rbh
scnpilot_p_inoc_scaffold_1815_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11208..12107)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHA7_9SPHN
CHAD domain protein {ECO:0000313|EMBL:AKH42221.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythr
hypothetical protein
scnpilot_p_inoc_scaffold_1815_15
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..13080)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0837
hypothetical protein
UPI0003D02526 related cluster Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_1815_16
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13117..14898)
DNA (1782bp) protein (594aa)
aspartyl-tRNA synthetase (EC:6.1.1.12) rbh
Aspartate--tRNA ligase n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q0J3_9SPHN rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EJL33612.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
scnpilot_p_inoc_scaffold_1815_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15066..16271
DNA (1206bp) protein (402aa)
Ribonuclease D {ECO:0000313|EMBL:AKH41856.1}; EC=3.1.13.5 {ECO:0000313|EMBL:AKH41856.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Al
Ribonuclease D n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHD8_9SPHN rbh
ribonuclease D
scnpilot_p_inoc_scaffold_1815_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16283..16450
DNA (168bp) protein (56aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A187
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:AKH41857.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacte
LysR family transcriptional regulator
Displaying 18 items

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