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scnpilot_p_inoc_scaffold_2621

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2621_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(384..803)
DNA (420bp) protein (140aa)
Cytidine deaminase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKQ3_9SPHN
Cytidine deaminase {ECO:0000313|EMBL:GAD49155.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
cytidine deaminase
scnpilot_p_inoc_scaffold_2621_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(879..1577)
DNA (699bp) protein (233aa)
Putative glycoside hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUU2_9SPHN rbh
Glycosyl hydrolases family 25 {ECO:0000313|EMBL:AKH42759.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="A
lysozyme
scnpilot_p_inoc_scaffold_2621_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1617..2099)
DNA (483bp) protein (161aa)
UPF0262 protein NT2_05_00740 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A320_9SPHN
UPF0262 protein NT2_05_00740 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
hypothetical protein
scnpilot_p_inoc_scaffold_2621_4
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2279..3799
DNA (1521bp) protein (507aa)
replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCN7_9SPHN rbh
DNA helicase {ECO:0000313|EMBL:KEO92264.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;
scnpilot_p_inoc_scaffold_2621_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3836..5143)
DNA (1308bp) protein (436aa)
Major cardiolipin synthase ClsA {ECO:0000313|EMBL:AKH42763.1}; EC=2.7.8.- {ECO:0000313|EMBL:AKH42763.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythr
Phospholipase D family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCN5_9SPHN rbh
phospholipase D
scnpilot_p_inoc_scaffold_2621_6
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5215..5559
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKP8_9SPHN
scnpilot_p_inoc_scaffold_2621_7
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5863..6606
DNA (744bp) protein (248aa)
ATPase involved in chromosome partitioning n=1 Tax=Novosphingobium sp. AP12 RepID=J2P5C4_9SPHN
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EJL22197.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
ParA family ATPase
scnpilot_p_inoc_scaffold_2621_8
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6729..7232
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N793_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC64448.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_2621_9
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8048..8461
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037284A0
Uncharacterized protein {ECO:0000313|EMBL:EPR14878.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chi
transposase
scnpilot_p_inoc_scaffold_2621_10
Campylobacter gracilis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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8511..8867
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369FFA1
Uncharacterized protein {ECO:0000313|EMBL:EEV16637.1}; TaxID=553220 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobac
scnpilot_p_inoc_scaffold_2621_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9114..9374)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0C8C
Putative secreted protein {ECO:0000313|EMBL:AJA07680.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
scnpilot_p_inoc_scaffold_2621_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9527..11488)
DNA (1962bp) protein (654aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000313|EMBL:AKH42767.1}; EC=3.4.24.- {ECO:0000313|EMBL:AKH42767.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A314_9SPHN rbh
ATP-dependent Zn protease
scnpilot_p_inoc_scaffold_2621_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11601..12053)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INY9_9SPHN
hypothetical protein
SnoaL-like domain protein {ECO:0000313|EMBL:AKH42238.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter
Displaying 13 items

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