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scnpilot_p_inoc_scaffold_2705

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2705_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..707
DNA (705bp) protein (235aa)
ATPase AAA (EC:3.6.4.6)
Putative ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYA6_9SPHN
Putative ATPase {ECO:0000313|EMBL:GAD47513.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tar
scnpilot_p_inoc_scaffold_2705_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(809..1840)
DNA (1032bp) protein (344aa)
Small-conductance mechanosensitive channel n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5T4_ERYLH rbh
small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ABC64957.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" so
scnpilot_p_inoc_scaffold_2705_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1837..2850)
DNA (1014bp) protein (338aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:ABD24726.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABD24726.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
DNA polymerase I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBP7_NOVAD
scnpilot_p_inoc_scaffold_2705_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2801..4513)
DNA (1713bp) protein (571aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBP7_NOVAD
DNA polymerase {ECO:0000313|EMBL:KHK89503.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium mala
scnpilot_p_inoc_scaffold_2705_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5439..6467)
DNA (1029bp) protein (343aa)
Extended-spectrum beta-lactamase PER-1 {ECO:0000313|EMBL:AKH43652.1}; EC=3.5.2.6 {ECO:0000313|EMBL:AKH43652.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria
Putative beta-lactamase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQ63_9SPHN rbh
beta-lactamase
scnpilot_p_inoc_scaffold_2705_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6701..8338)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYA0_9SPHN rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1219035 spec
groEL; chaperonin GroEL
scnpilot_p_inoc_scaffold_2705_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8436..8723)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHS9_9SPHN
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1219035 spec
molecular chaperone GroES
scnpilot_p_inoc_scaffold_2705_8
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8873..10339)
DNA (1467bp) protein (489aa)
Multidrug resistance protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHB1_9SPHN rbh
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:CCA91362.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
scnpilot_p_inoc_scaffold_2705_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10471..11022
DNA (552bp) protein (184aa)
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCC9_NOVAD
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABD24481.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
scnpilot_p_inoc_scaffold_2705_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11136..12170)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKH41800.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
scnpilot_p_inoc_scaffold_2705_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12316..12693)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKG9_9SPHN
50S ribosomal protein L7
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
scnpilot_p_inoc_scaffold_2705_12
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12772..13287)
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB37_9SPHN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
50S ribosomal protein L10
scnpilot_p_inoc_scaffold_2705_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13606..13827)
DNA (222bp) protein (74aa)
Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCD3_NOVAD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD24477.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_p_inoc_scaffold_2705_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13827..14363)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCD4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH43662.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_2705_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14387..14533)
DNA (147bp) protein (49aa)
2,3-dihydroxybenzoate-2,3-dehydrogenase {ECO:0000313|EMBL:CCP16935.1}; EC=1.3.1.28 {ECO:0000313|EMBL:CCP16935.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
2,3-dihydroxybenzoate-2,3-dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D357F1
short-chain dehydrogenase/reductase SDR
Displaying 15 items

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