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scnpilot_p_inoc_scaffold_915_12

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(10217..11146)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5AABC related cluster n=1 Tax=unknown RepID=UPI0003D5AABC similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 309.0
  • Bit_score: 545
  • Evalue 3.30e-152
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETI60299.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 309.0
  • Bit_score: 544
  • Evalue 1.30e-151
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 309.0
  • Bit_score: 533
  • Evalue 3.60e-149

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGAGCAATCCCGGCACGCCGACTTTCGATCAGCTGAGAATATTCCTGGCGATCGTCGATACGGGCAGTTTCGCGGCAGCTGGGCGCAAGCTCAACCGGGCGGTTTCCGTCATCAGCTATGGTATCTCCAATCTGGAGGCGCAGCTCGGGCTTACGCTGTTCGAGCGGGAAGGGACACGCAAGCCGCAGCTGACCGTGGCGGGGCGCGCATTGCTGGCAGAAGTGCGGACGATTTCCGACGGGATCGATGGGCTCCGCGCCAAGGTAAAGGGCCTGCTTGACGGCTTGGAGGCGGAAGTCGATCTGGCCGTGGATGTGATGCTCCCCACCGACAGGCTGGCGCGGGTGCTGCGCGCCTTCGCGAAGGAATTCCCCACCGTGCAGTTGCGGCTCCATGCGGAAACGCTGGGCGCGATTACGGCCATGGTCCTGGATCGCAAGGCCATCATCGGCATATCCGGCCCGCTTTCCACGGGTGTGGAGGGCATCGAGAGTGTTTCGGCGGGGTCTATCGCCATGGTCCCGGTGGCGGCGCCTGATCATCCGCTTGGGAGGATGGACCCGATCCCGTCTGGCGCCGGGAGGGAATATACTCAGATCGTGCTGACTGACCGTTCGCGCTTTACCGAAGGGCAGGATTTTTCCGTGCTCAGCCCCAAGACCTGGCGCCTGGCCGATCTGGGCGCCAAGCATGCCTTGCTGCGCGAAGGGATCGGGTGGGGGAACATGCCGTTGCCGATGATCGAGGACGATCTGGTGGTGGGCACCTTGGTGCGCCTTGTCATGCCCGATCATCCGGGCGGCACCTATCGCTTCTCTGGCATCTGGCGGCGCGATGCGCCTCCGGGTCCGGCAGCGTCCTGGCTGCTCGATCAGTTCGTGGCGCTGGGGCAGGATGATCGGGAATTGCCGGGCATGGGCGACGTTTGA
PROTEIN sequence
Length: 310
VSNPGTPTFDQLRIFLAIVDTGSFAAAGRKLNRAVSVISYGISNLEAQLGLTLFEREGTRKPQLTVAGRALLAEVRTISDGIDGLRAKVKGLLDGLEAEVDLAVDVMLPTDRLARVLRAFAKEFPTVQLRLHAETLGAITAMVLDRKAIIGISGPLSTGVEGIESVSAGSIAMVPVAAPDHPLGRMDPIPSGAGREYTQIVLTDRSRFTEGQDFSVLSPKTWRLADLGAKHALLREGIGWGNMPLPMIEDDLVVGTLVRLVMPDHPGGTYRFSGIWRRDAPPGPAASWLLDQFVALGQDDRELPGMGDV*