name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_915_1
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1048
|
multi-sensor signal transduction histidine kinase; K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
histidine kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024897AE
two-component system sensor histidine kinase
|
|
scnpilot_p_inoc_scaffold_915_2
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1045..1665
|
Chemotaxis protein CheY n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IAV0_9SPHN
Response regulator FixJ {ECO:0000313|EMBL:KEO91357.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
LuxR family two component transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_915_3
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1687..2046)
|
UPI0003D61FB2 related cluster n=1 Tax=unknown RepID=UPI0003D61FB2
Uncharacterized protein {ECO:0000313|EMBL:ETI60242.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_915_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2202..3014
|
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F207AF
UspA domain-containing protein
Tax=BJP_IG2102_Porphyrobacter_62_18
|
|
scnpilot_p_inoc_scaffold_915_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3113..4132
|
ptcA; putrescine carbamoyltransferase (EC:2.1.3.6)
rbh
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicr
Putrescine carbamoyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9E7_HYPSM
rbh
|
|
scnpilot_p_inoc_scaffold_915_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4150..5559
|
Amino acid permease-associated region n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAY2_HYPSM
rbh
amino acid permease
rbh
Amino acid permease-associated region {ECO:0000313|EMBL:CCB66299.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyph
|
|
scnpilot_p_inoc_scaffold_915_7
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5552..6673
|
aguA; agmatine deiminase (EC:3.5.3.12)
rbh
Porphyromonas-type peptidyl-arginine deiminase family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDU8_9CAUL
rbh
amino acid permease-associated protein Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
|
|
scnpilot_p_inoc_scaffold_915_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6675..7577
|
Carbamate kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAY0_HYPSM
rbh
ybcF; carbamate kinase
rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (str
|
|
scnpilot_p_inoc_scaffold_915_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7584..8282)
|
CRP/FNR family transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRF1_AZOS1
fnr; CRP/FNR family transcriptional regulator
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:BAI70980.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source
|
|
scnpilot_p_inoc_scaffold_915_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8429..8989
|
nitroreductase n=2 Tax=Pseudomonas RepID=UPI000372E134
oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_915_11
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9315..10151
|
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Novosphingobium sp. AP12 RepID=J2P4D4_9SPHN
rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJL21872.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
alpha/beta hydrolase fold protein
|
|
scnpilot_p_inoc_scaffold_915_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10217..11146)
|
UPI0003D5AABC related cluster n=1 Tax=unknown RepID=UPI0003D5AABC
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETI60299.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
LysR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_915_13
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11259..11957
|
Pirin n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IQM4_9SPHN
rbh
Pirin {ECO:0000313|EMBL:EQB31125.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
Pirin domain-containing protein
|
|
scnpilot_p_inoc_scaffold_915_14
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11993..12529)
|
chemotaxis protein CheY n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A684
Response regulator receiver protein {ECO:0000313|EMBL:EGD57194.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
Fis family two component transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_915_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12526..13812)
|
histidine kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B47E9E
rbh
Sensor histidine kinase prrB {ECO:0000313|EMBL:GAO55521.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
histidine kinase
|
|
scnpilot_p_inoc_scaffold_915_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13809..14519)
|
surfeit locus 1 family protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B652E5
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion {ECO:0000313|EMBL:GAO55522.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_915_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14516..14920)
|
cytochrome O ubiquinol oxidase n=1 Tax=Rhizobium loti RepID=UPI000381C53A
Cytochrome O ubiquinol oxidase subunit IV {ECO:0000313|EMBL:GAO55523.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
cytochrome o ubiquinol oxidase subunit IV
|
|
scnpilot_p_inoc_scaffold_915_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14917..15558)
|
cytochrome O ubiquinol oxidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A83B
rbh
Cytochrome O ubiquinol oxidase subunit III {ECO:0000313|EMBL:GAO55524.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
cytochrome o ubiquinol oxidase subunit III
rbh
|
|
scnpilot_p_inoc_scaffold_915_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15555..17543)
|
cytochrome O ubiquinol oxidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B50E55
rbh
Cytochrome O ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAO55525.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
cytochrome-c oxidase
|
|
scnpilot_p_inoc_scaffold_915_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17591..18808)
|
Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDX5_9SPHN
rbh
Cytochrome o ubiquinol oxidase subunit II {ECO:0000313|EMBL:EGD57188.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
cytochrome o ubiquinol oxidase subunit II
|
|
scnpilot_p_inoc_scaffold_915_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19221..20126
|
arabinose ABC transporter permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B65EBA
MFS permease {ECO:0000313|EMBL:GAO55527.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD
arabinose ABC transporter permease
|
|
scnpilot_p_inoc_scaffold_915_22
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20244..20639
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66370.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
|
|
scnpilot_p_inoc_scaffold_915_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20784..20981
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66372.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
|
|
scnpilot_p_inoc_scaffold_915_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20978..21469
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82983.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_915_25
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21530..22936)
|
Putative efflux pump outer membrane protein n=1 Tax=Sphingobium sp. SYK-6 PF7_9SPHN">RepID=G2IPF7_9SPHN
rbh
putative efflux pump outer membrane protein
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:BAK68138.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
|
|
scnpilot_p_inoc_scaffold_915_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22946..26137)
|
Putative efflux pump inner membrane protein n=1 Tax=Sphingobium sp. SYK-6 PF6_9SPHN">RepID=G2IPF6_9SPHN
rbh
Putative efflux pump inner membrane protein {ECO:0000313|EMBL:BAK68137.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
putative efflux pump inner membrane protein
rbh
|
|
scnpilot_p_inoc_scaffold_915_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26159..27415)
|
Putative efflux pump periplasmic linker protein n=1 Tax=Sphingobium sp. SYK-6 PF5_9SPHN">RepID=G2IPF5_9SPHN
rbh
putative efflux pump periplasmic linker protein
Putative efflux pump periplasmic linker protein {ECO:0000313|EMBL:BAK68136.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;"
|
|
scnpilot_p_inoc_scaffold_915_28
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27804..28517)
|
Transcriptional regulator, TetR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQV3_SPHAL
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGB58833.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
TetR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_915_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28558..29916)
|
Alpha,alpha-trehalose-phosphate synthase {ECO:0000313|EMBL:KHS42701.1}; EC=2.4.1.15 {ECO:0000313|EMBL:KHS42701.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Trehalose 6-phosphate synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G877_NOVAD
rbh
|
|
scnpilot_p_inoc_scaffold_915_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29913..31697)
|
glucoamylase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287E33B
glucoamylase
Glucoamylase {ECO:0000313|EMBL:AIT06132.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|