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scnpilot_p_inoc_scaffold_915_25

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(21530..22936)

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux pump outer membrane protein n=1 Tax=Sphingobium sp. SYK-6 PF7_9SPHN">RepID=G2IPF7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 468.0
  • Bit_score: 644
  • Evalue 7.90e-182
  • rbh
putative efflux pump outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 468.0
  • Bit_score: 644
  • Evalue 2.20e-182
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:BAK68138.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 468.0
  • Bit_score: 644
  • Evalue 1.10e-181

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCCATCCACTCGTGCTCTCATGGCTTCGCTATCCGCGCTTGCGCTCAGCGCATGCGCGGTCGGGCCGGACTTCGTCGCACCCGTCCCACCCCAGACGACGTCCGGCCCGTTACTTTCCGCTGCCAATCCGGCTTTCAGTGCCGAAGAGGCGGCGAAGGACTGGTGGAAGCTCTATGACGATCCTGTGCTTGACGGGCTCGTTTCCGATGCGCTCGCATCCAATACCGATATTCGCGTTGCCCTCGCCAACATCGAGAAGGCGCGGGCGGGCCTGCGCGGATCGCGTGCCGGGCGGTTGCCGCAGGGCACTATCGGAGCCGGTGCAACCTATGGTCGCCTGCCGGAATCGCAGCGGGCCGCAGACGCTGACCGGGAAAGCTGGACGATAGATGCCGGGCTGGAGGTCGGATATGAACTCGACTTGTTCGGCCGGGTAGGGCGCGATATCGAAGCCGCTCGCGGCGATGTGCAGGCGGCGCAGGCCGATGCCGATGCCGTGCGAGTGATCGTGGTGGCGGACACGACCCGTGCCTATGCCGATGCCGCTTCGGGCGGCGCCCGGCTGGCTGTTGCGCGGCGGATCGTTGGCTTGTTGGATCGTTCGCTGGAACTGACCAGCAAGCGCTACGAAGCAGGCCTCGCCACGGGGCTCGACGTGGCTCAGATTTCCGCCCTGCGCGATCAGCGTGCGGCGGAGATCCCGCTGATCGAGGCTGAGAGGCAGGCCGCGCTGTTCCGCCTTGCTACGCTCACGGGCAGGCCTCCTGCAGAACTGCCGGAGATTGCCTCGGCCCGGGCCGTCAGCCTTGAGATCAATCGGCCGATACCAGTGGGTGACGGTGCAGCGCTGCTGGCCCGCCGCCCGGACATTCGCGCGGCAGAGAACCGCCTTGCAGCCTCTACCGCGCGCATTGGTGTCGCCACGGCGGACCTTTATCCGCGCATCACTCTGGGTGGTTCGATCGGATCGACCGGTTCCGATATTGGCGACATCTTCAGCGGTGGGCCGCTGCGTTGGCTGCTGGGGCCTCTGCTGAGCTGGACCTTCCCCAATCAGGAGCCCATCCGGGCGCGGATCGCTGCTGCCGAGGCGGATTCGCACGCTCGGCTGGCGGAGTTCGACGGGGCTGTTCTGGGCGCGCTGGAGGAAACGGAAACGGCGCTTTCCGGCTATGCTCATTCGCTTGAGCGCCGCCGCTCGCTCCAATCCGCGCGGGATCAGGCGAAACGCGCCGCGGACATAACCGATGCGCAATTGCGCGAAGGAACCGTGGACTCGCTGCGCGTTCTGGATGTCCAGCGCACCTATGCCGAAACGGAAGCCGCTCTGGCCGATCAGGATGCGCAGGTCTCGCGCCGCCAGATCGATTTGTTCCGCGCCCTTGGCGGTGGGTGGAGCTCTTAA
PROTEIN sequence
Length: 469
MPSTRALMASLSALALSACAVGPDFVAPVPPQTTSGPLLSAANPAFSAEEAAKDWWKLYDDPVLDGLVSDALASNTDIRVALANIEKARAGLRGSRAGRLPQGTIGAGATYGRLPESQRAADADRESWTIDAGLEVGYELDLFGRVGRDIEAARGDVQAAQADADAVRVIVVADTTRAYADAASGGARLAVARRIVGLLDRSLELTSKRYEAGLATGLDVAQISALRDQRAAEIPLIEAERQAALFRLATLTGRPPAELPEIASARAVSLEINRPIPVGDGAALLARRPDIRAAENRLAASTARIGVATADLYPRITLGGSIGSTGSDIGDIFSGGPLRWLLGPLLSWTFPNQEPIRARIAAAEADSHARLAEFDGAVLGALEETETALSGYAHSLERRRSLQSARDQAKRAADITDAQLREGTVDSLRVLDVQRTYAETEAALADQDAQVSRRQIDLFRALGGGWSS*