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scnpilot_p_inoc_scaffold_1268_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 1..1767

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQC0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 594.0
  • Bit_score: 711
  • Evalue 6.60e-202
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; S similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 588.0
  • Bit_score: 739
  • Evalue 4.10e-210
surface antigen (D15) similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 589.0
  • Bit_score: 708
  • Evalue 1.20e-201

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
GAGGGCCTGACCGAGACGGCGGGCATCTATGGCTATGCCTTTGCCGATGTGCGGCCCGAGTTCAGCCGCAATCGCGACGATCTGACGATGAATGTGAAGTTCGTGCTCAACGAGGCGCCGCGCGTCTATGTCGAGGCGATCAACATCAACGGCAATACGCTGACCCAGGACAAGGTGGTGCGGCGCGAATTCCGCGTGGCCGAAGGCGATGCCTTCAACTCGCTGGCGGTCAAACGCTCCACCGCGCGCATCAATTCGCTCGGCTATTTCCAGGAAAACTTCAAGATCGAGCAAAGCCAGGGCTCCGCACCGGACCGCATCGTGCTCGACGCCAATGTCCAGGAACAGGCCACTGGCGAACTCCAGCTCTCCGCCGGTTTCTCAAGCCTCGAAAGCTTCATCCTGCAGGGTTCCATCAAGCAGCGGAATTTCCGCGGCAGGGGGCAGACGGTGGGCGCCAGCGTCAACTGGTCGCGTTATTCGCGGTCAGCCACGCTGAGCTTTACCGAACCCTATGTGTTCGATCGCAACATCTCGATGGGTATCGATATCTATCGGCGCGATATGAATAATTGGAACTATTATAATAACAATCGTAATTCTACCTTCAAGCAGGCTACCACCGGGTTCCAGGTCCGTGCGGGTATTCCGATTACTGAAAATGCTTCGGTCATCGGGCGTTACACGCTTAACTTCGACGACGTTACGCTGGATGAAGCGCTGTATTACAGCGACCGGGTGAATCCGCCGAACTTCGAGTGCGATGTCTTGCTTGCCGGCCGATATCTCTGCGATGCTATCGGTTCGCGGACCAGTTCGATTGTCGGTGTCTCGATGGTGTACGATACGCTGGATAACCGTGTACGTCCGACGCGAGGGGACACTTTCTCGATCAGTCTTGACGTTGCCGGTCTGGGCGGCTCGGAAAAATACGCGAAACTGCGCCTCAACGCAGCAAAATACTGGCAGATTGCCCCAGGCTGGGTTTTCTCGGTTTCCGCCGAGGGCGGTTATGTGAAGGGCTTCAAGGATCGCGGTGTCGGTCAGGATAGCGTTCGCCTGACGGACCGCTTCTTCCTGGGCGATCCGCAGATCCGCGGTTTCGACATTCGCGGTGTTGGCCCTCGTATTCTCCGCGAGTTTTATGTGCTCGACAACAATGGCAAGGCGGTGTGCGAGGATGGCACTTCGCAGGACAATTGCCAGAGCAATGGCGGTTATACGTTCTACAGCGATCCCAAGAACCCCATCGACGATCCGCTGGGCGGCGATGCCTATTACCTGACGCGTGCCGAACTGGAGATTCCGCTTGGAACCGGGGCTCGTGAAATGGGCCTGCGGCCTTCCATCTTTGTCGATGCAGGCGCCGTTTTCAGTGTGAGGAAGCCAATTCTGACTGACACGGGGCCGTCATATTTCATCCCCACGCGGGATAGCGATGGCAAACAGCTCTATACCCAGATCGATTCCGCATCGCTGGTGGATGGTATCTGTACGCCGGACAAGACCTCGACCGTGACCAATCCGACCAATCCAAGCAGGCCGGACTGTTTGACGAGTGCGGATAATATCGCGCTCGGCAGCACGCAGCGCGGTTTCAGGGAAGCTTTCCTGGGTGACTCGCCCAAACCGCGCATTGCCGTGGGTATCGGGGTAAATTGGAATTCGCCTTTCGGTCCATTCCGGATCGACGTTGCCAAGGTGTTGATGAAGCAGCCTGGCGATGACACCAAAACCTTCACGTTCAACGTAGGAACCCAATTCTGA
PROTEIN sequence
Length: 589
EGLTETAGIYGYAFADVRPEFSRNRDDLTMNVKFVLNEAPRVYVEAININGNTLTQDKVVRREFRVAEGDAFNSLAVKRSTARINSLGYFQENFKIEQSQGSAPDRIVLDANVQEQATGELQLSAGFSSLESFILQGSIKQRNFRGRGQTVGASVNWSRYSRSATLSFTEPYVFDRNISMGIDIYRRDMNNWNYYNNNRNSTFKQATTGFQVRAGIPITENASVIGRYTLNFDDVTLDEALYYSDRVNPPNFECDVLLAGRYLCDAIGSRTSSIVGVSMVYDTLDNRVRPTRGDTFSISLDVAGLGGSEKYAKLRLNAAKYWQIAPGWVFSVSAEGGYVKGFKDRGVGQDSVRLTDRFFLGDPQIRGFDIRGVGPRILREFYVLDNNGKAVCEDGTSQDNCQSNGGYTFYSDPKNPIDDPLGGDAYYLTRAELEIPLGTGAREMGLRPSIFVDAGAVFSVRKPILTDTGPSYFIPTRDSDGKQLYTQIDSASLVDGICTPDKTSTVTNPTNPSRPDCLTSADNIALGSTQRGFREAFLGDSPKPRIAVGIGVNWNSPFGPFRIDVAKVLMKQPGDDTKTFTFNVGTQF*