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scnpilot_p_inoc_scaffold_1268

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1268_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1767
DNA (1767bp) protein (589aa)
Outer membrane protein assembly factor BamA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQC0_9SPHN
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; S
surface antigen (D15)
scnpilot_p_inoc_scaffold_1268_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1767..2480
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYG5_9SPHN
Periplasmic chaperone {ECO:0000313|EMBL:AKH41882.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;
hypothetical protein
scnpilot_p_inoc_scaffold_1268_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2507..2980
DNA (474bp) protein (158aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHW3_9SPHN
scnpilot_p_inoc_scaffold_1268_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3138..3365
DNA (228bp) protein (76aa)
50S ribosomal protein L31 n=2 Tax=Novosphingobium RepID=F6ILL8_9SPHN
50S ribosomal protein L31 {ECO:0000313|EMBL:AKH41880.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter
50S ribosomal protein L31
scnpilot_p_inoc_scaffold_1268_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3464..3889)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida HB3267 RepID=L0FEK5_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA71652.1}; TaxID=1215088 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
scnpilot_p_inoc_scaffold_1268_6
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3895..4527)
DNA (633bp) protein (211aa)
Prolyl 4-hydroxylase, alpha subunit n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDL7_9SPHN rbh
Oxygenase {ECO:0000313|EMBL:KHL26217.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
2OG-Fe(II) oxygenase
scnpilot_p_inoc_scaffold_1268_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4954..5673
DNA (720bp) protein (240aa)
Heme exporter protein C n=2 Tax=Novosphingobium RepID=F6ILM2_9SPHN
heme exporter protein C
Heme exporter protein C {ECO:0000313|EMBL:CCA92324.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_1268_8
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5814..6275
DNA (462bp) protein (154aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYF9_9SPHN
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
cytochrome c-type biogenesis protein CcmE
scnpilot_p_inoc_scaffold_1268_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6300..8261
DNA (1962bp) protein (654aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHW1_9SPHN rbh
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:AKH41873.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.
cytochrome c assembly protein
scnpilot_p_inoc_scaffold_1268_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8258..8794
DNA (537bp) protein (179aa)
Cytochrome c-type biogenesis protein CcmG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3J0_9SPHN
Cytochrome c-type biogenesis protein CcmG {ECO:0000313|EMBL:GAD47561.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
periplasmic protein thiol
scnpilot_p_inoc_scaffold_1268_11
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8791..9195
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHF9_9SPHN
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
cytochrome C biogenesis protein
scnpilot_p_inoc_scaffold_1268_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9192..9845
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZQB1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41870.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1268_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9956..11911
DNA (1956bp) protein (652aa)
Probable potassium transport system protein kup n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYF3_9SPHN rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
trkD; potassium transport protein Kup
scnpilot_p_inoc_scaffold_1268_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..12543)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8I1_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25842.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_1268_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12680..13345)
DNA (666bp) protein (222aa)
Probable intracellular septation protein A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3I6_9SPHN
Intracellular septation protein {ECO:0000313|EMBL:AKH41867.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source=
intracellular septation protein A
scnpilot_p_inoc_scaffold_1268_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13345..14268)
DNA (924bp) protein (308aa)
cell division protein FtsY n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003096600 rbh
Signal recognition particle receptor FtsY {ECO:0000313|EMBL:AKH41866.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.
signal recognition particle GTPase rbh
scnpilot_p_inoc_scaffold_1268_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14265..15449)
DNA (1185bp) protein (395aa)
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB {ECO:0000313|EMBL:AKH41865.1}; EC=2.-.-.- {ECO:0000313|EMBL:AKH41865.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteri
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE45_9SPHN rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1268_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15446..16255)
DNA (810bp) protein (270aa)
Diaminopimelate epimerase {ECO:0000313|EMBL:AKH41864.1}; EC=5.1.1.7 {ECO:0000313|EMBL:AKH41864.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacte
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYE8_9SPHN rbh
scnpilot_p_inoc_scaffold_1268_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16431..17051
DNA (621bp) protein (207aa)
Putative glutathione S-transferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IG41_AZOC5 rbh
glutathione S-transferase rbh
Putative glutathione S-transferase {ECO:0000313|EMBL:BAF86032.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizob
scnpilot_p_inoc_scaffold_1268_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17054..18742)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBR5_ERYLH rbh
Phytochrome-like protein cph2 {ECO:0000313|EMBL:AKH41863.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="A
hypothetical protein
scnpilot_p_inoc_scaffold_1268_21
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18906..19316
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILN6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92338.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_1268_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19394..19564
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEZ8_9SPHN
CsbD-like protein {ECO:0000313|EMBL:AKH41861.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrob
general stress protein CsbD
scnpilot_p_inoc_scaffold_1268_23
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19641..21317)
DNA (1677bp) protein (559aa)
thiamine pyrophosphate protein (EC:2.2.1.6)
Acetolactate synthase large subunit n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBR3_ERYLH rbh
Acetolactate synthase large subunit {ECO:0000313|EMBL:ABC62878.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="E
scnpilot_p_inoc_scaffold_1268_24
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21769..23085)
DNA (1317bp) protein (439aa)
Putative major facilitator superfamily transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYC2_9SPHN rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAD47528.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
major facilitator transporter
scnpilot_p_inoc_scaffold_1268_25
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23223..23789
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L022_9SPHN
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KHL25643.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobactera
Displaying 25 items

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