ggKbase home page

scnpilot_p_inoc_scaffold_1268_18

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(15446..16255)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000313|EMBL:AKH41864.1}; EC=5.1.1.7 {ECO:0000313|EMBL:AKH41864.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 269.0
  • Bit_score: 418
  • Evalue 9.60e-114
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 269.0
  • Bit_score: 397
  • Evalue 3.50e-108
Diaminopimelate epimerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYE8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 264.0
  • Bit_score: 407
  • Evalue 1.20e-110
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCGTGTTCCCTTCGTCAAGATGCATGGGCTGGGCAATGATTTCGTCGTGCTGGATGCGCGGCGCGATCAGTTGATCCCGATTACCAACGATCTCGCCCGCGCGCTGGCTGATCGGCGAACCGGGATCGGCTGCGATCAGCTGATCCTGCTGGAACATTCCGATGTGGCCAGTTTCCGCATGCGGATATTCAACAATGACGGCAGCGAAGTGGGTGCCTGTGGCAATGCCACCCGTGCCGTCGCCCTGTTGCATGGCGAACCGGCCACCATCGAAACGGCAGGCGGTATTCTGGAAGCACGGCCTGCGGAGGGCGGCATCTCCGTTGACATGGGCACGCCCCGCTTCGGTTGGGACGAAATTCCGCTCGCCTATCCGATGGATACTTCCTCCATGCCGGTTGCGTGGGAAGACCTTGAAAACCCCATGGCCGTGAATGTCGGCAATCCGCATGCTATCTTCTTCGTGGAAGATGCCGATGCGGTGGACCTCGAACGGCTGGGGCCGCAGATCGAACACGATCCCATCTTTCCGGAGCGGGTGAACGTCAATGTCGCCCAGATTGTCAGCCGCGAGGCCATACTGCTGCGCGTTTGGGAACGCGGGGCGGGACTGACGCGTGCCTGCGGCACCGGCGCCTGCGCAACAGCCGTCGCTGCGATGAAGAAGGGGCTGGTGGACCGCGAAGTGGCAGTCACCCTGCCCGGCGGCACACTGACCATCGCCTGGGGGCCGGATAATCGCATCGTCATGAACGGGCCGGCTGCGGAGAGCTTTCGCGGCACCTTCGACCCTGTGGATTTCGCATGA
PROTEIN sequence
Length: 270
MRVPFVKMHGLGNDFVVLDARRDQLIPITNDLARALADRRTGIGCDQLILLEHSDVASFRMRIFNNDGSEVGACGNATRAVALLHGEPATIETAGGILEARPAEGGISVDMGTPRFGWDEIPLAYPMDTSSMPVAWEDLENPMAVNVGNPHAIFFVEDADAVDLERLGPQIEHDPIFPERVNVNVAQIVSREAILLRVWERGAGLTRACGTGACATAVAAMKKGLVDREVAVTLPGGTLTIAWGPDNRIVMNGPAAESFRGTFDPVDFA*