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scnpilot_p_inoc_scaffold_1171_20

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(20776..21237)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUH3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 150.0
  • Bit_score: 211
  • Evalue 7.30e-52
Biopolymer transport protein ExbD {ECO:0000313|EMBL:AKH43440.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 143.0
  • Bit_score: 234
  • Evalue 1.10e-58
biopolymer transport exbD transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 151.0
  • Bit_score: 210
  • Evalue 2.70e-52

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGCAATGACAGGCGGCAAAGATGATGGCTCGCCGATGATGGAAATGAACACGACGCCGTTGATCGACGTCATGCTCGTTCTCCTCATCATGCTCATCTTTACGATCCCTGTGGCGACGCATTCGGTCGATATCGACCTGCCGAGCCCCACTCCTCCGACGGACACACCTCCGGTAGACCCGATCAAGAACAAGATCGTGTTGACCCCGAATAACGAGATTCTCTGGAACGGTCAGCCGATCAGCCAGGCGGGTCTTGTTTCGAACCTGCAGCAGTCCCTGACCTTCTCGGTCGAGCCTGAACTGCAGTTCGAGCCGGAAGCGATGGCCAGCTACGATCTTTCGGCCAAGGTGCTGAACCTGATCAAGGCTTCCAAGGTCACCAAGTTCGGCTTCGTCGGCAACGAGAAGTATCGCGTGTTCGGGAAGTCCGAAAACGCAGGCCCTGCCGTCGTCAACTGA
PROTEIN sequence
Length: 154
MAMTGGKDDGSPMMEMNTTPLIDVMLVLLIMLIFTIPVATHSVDIDLPSPTPPTDTPPVDPIKNKIVLTPNNEILWNGQPISQAGLVSNLQQSLTFSVEPELQFEPEAMASYDLSAKVLNLIKASKVTKFGFVGNEKYRVFGKSENAGPAVVN*