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scnpilot_p_inoc_scaffold_1171_21

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(21262..21798)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKF1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 177.0
  • Bit_score: 302
  • Evalue 2.80e-79
  • rbh
Biopolymer transport protein ExbD {ECO:0000313|EMBL:GAD49030.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 177.0
  • Bit_score: 302
  • Evalue 3.90e-79
biopolymer transport ExbD protein similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 164.0
  • Bit_score: 285
  • Evalue 1.30e-74

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCCATTTCGACAGGCGGTGGCGGCGAAGAGAAGCCGATGTCGGACATCAACACCACGCCCCTCGTGGACGTGATGCTGGTGCTCCTGATCATCTTCCTGATCGCCGTCCCGGTCACCTTGCAGACAATCGAAAAGCTTCAGATTCCCGTATTCGAATCGGCCGAGTCTAAGGACAAGGTCGAGAACCTGCTGCTGACCGTGAGCACCACCGACGAAGCCGGACGCAGTGCCGGTGAACCGGGTTACACCGGTGCCTCGCGCAACGGTGAATGCCGCGTTTATTTCAACAACATCACTCCGGTGACGTCGCAGGAACTGTACGACCAGGCATTCGGACGCCTGGACGCTATCGTTCAGCGTGAAGGCGGTATCGACGCGATCCGCAACGATCCGGAAAAGATCCCGCAGGTTCACATCCGTGGCGACATCAACGCGCCCTGGCGCTGTGTGGCCGGCGCGATCTACAACGTCCAGGCGGCCGGTTATCCGACCGTCGGCTTCATCTCCAACCCTGTCGATCCGAACGCGGGTTGA
PROTEIN sequence
Length: 179
MAISTGGGGEEKPMSDINTTPLVDVMLVLLIIFLIAVPVTLQTIEKLQIPVFESAESKDKVENLLLTVSTTDEAGRSAGEPGYTGASRNGECRVYFNNITPVTSQELYDQAFGRLDAIVQREGGIDAIRNDPEKIPQVHIRGDINAPWRCVAGAIYNVQAAGYPTVGFISNPVDPNAG*