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scnpilot_p_inoc_scaffold_1007_29

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(33488..34447)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 309.0
  • Bit_score: 417
  • Evalue 1.50e-113
tRNA dimethylallyltransferase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GYL9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 309.0
  • Bit_score: 417
  • Evalue 1.10e-113
  • rbh
tRNA delta(2)-isopentenylpyrophosphate transferase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 319.0
  • Bit_score: 408
  • Evalue 1.80e-111

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAGCAAGGATCAGTCTCCGAATTCGTCCGGCCACTTGCCGGCGCTGGCGCTAATTGCAGGGCCGACCGCCAGCGGCAAGAGCGATCTCGCGGTTAGGCTCGCCTTCGCCCTGGCCGAGCGTGGCCGCAGGGGCGTGGTGGTGAATGCCGATGCGTCGCAAGTCTATGCCGATCTCGCCGTGCTGAGCGCGCGCCCTTCTGCCGAAGAAATGCACGGTGTGGAGCATCGGCTGTTCGGCGCCTGGGACGGGGCGACGGCATGCTCCGCCGCAGACTGGGCTGATGCTGCGAAGCGCGAAATCGCGGCGATACAGGCTCAGGGTGACGTGCCGATCCTGGTCGGCGGCACCGGCCTTTATATCCGCACGCTGCTGGACGGGATCGCACCGGTGCCGGAAATCGACGCGACTATGCGCGACGAAGTGCGCGGTCTTCCGGTCAGCGAGGCTTACGCGGCGCTGAAGGCGGAAGACCCGGACCGAGCCGCCCGGCTCAATGCGGCGGACACGACCCGGGTTGCCCGCGCGCTGGAAGTGGTCCGCTCCACCGGCAAGCCACTGTCCTACTGGCAGGCCCGCAGCGAGGGCGGGATCGGCGCTGAGGTCGATCTGCACGCCGCCGTCCTGCTGCCCCCGCGTGACGAACTTTACCGCCGTTGTGACATCCGCTTCGCCCGGATGCTGGAAAGCGGCGCAGTGGAAGAAGTGGAGGCGCTGCTTGCCCGCGGACTCGACCCCGCCCTGCCCGTGATGCGCGCCATCGGCGTGCCCGAAATCACCGGCTTTTTGCGCGGCGAATGGAGCCTTTCGGACGCGCAATCAAAAGGCTCTCAGGCGACACGAAATTACGTGAAGCGGCAATTCACATGGGCAAACCACCAGTTTCCGGGCGATTGGCAAAGATTCGAGTCACACGATTTCCCGTTAGAAAGCTATTTTGAAAGATTATTACTCAATTAA
PROTEIN sequence
Length: 320
MSKDQSPNSSGHLPALALIAGPTASGKSDLAVRLAFALAERGRRGVVVNADASQVYADLAVLSARPSAEEMHGVEHRLFGAWDGATACSAADWADAAKREIAAIQAQGDVPILVGGTGLYIRTLLDGIAPVPEIDATMRDEVRGLPVSEAYAALKAEDPDRAARLNAADTTRVARALEVVRSTGKPLSYWQARSEGGIGAEVDLHAAVLLPPRDELYRRCDIRFARMLESGAVEEVEALLARGLDPALPVMRAIGVPEITGFLRGEWSLSDAQSKGSQATRNYVKRQFTWANHQFPGDWQRFESHDFPLESYFERLLLN*