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scnpilot_p_inoc_scaffold_1007_47

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(52253..52867)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IBI9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 204.0
  • Bit_score: 385
  • Evalue 3.80e-104
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 204.0
  • Bit_score: 385
  • Evalue 5.30e-104
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 204.0
  • Bit_score: 384
  • Evalue 2.40e-104
  • rbh

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGTCGAAGCGCAAGAGCGCCAAGCATAAGCTTGACCGCCGCATGGGCGAAAACATCTGGGGCCGCCCGAACAGCCCCGTAAACCGCCGTTCCTATGGCCCCGGCCAGCATGGCCAGCGCCGCAAGGGCAAGATGTCGGACTTCGGTCTGCAGCTTCGCGCCAAGCAGAAGCTCAAGGGCTATTACGGCGACGTCACCGAAAAGCAGTTCAAGCGCACCTATCAGGAAGCGTCGCGCATGAAGGGCGATACCGGTCAGAACCTGATCGGTCTGCTCGAACAGCGTCTGGACATGGTCGTCTATCGCGCCAAGTTCGCTCCGACCATCTTCGCCGCCCGCCAGCTGGTGAGCCACGGCCACATTCGCGTCAATGGTGTGAAGTGCAACATCGCCTCGCGCCGCGTGAAGGTTGGCGACGTGATCAGCCTGGGCAACAAGGCCAAGGAAATGGCGCTGGTCGTCGAAGCTCAGGGCCTGCCCGAGCGTGACATTCCTGACTATGTTTCGGTCGACGGCACCGACAAGGTGACCTTCGCCCGCGTTCCGAGCCTGGACGAGGTGCCCTACCCCGTCACCATGGAACCGAACCTGGTCGTCGAATTCTATTCGCGCTGA
PROTEIN sequence
Length: 205
MSKRKSAKHKLDRRMGENIWGRPNSPVNRRSYGPGQHGQRRKGKMSDFGLQLRAKQKLKGYYGDVTEKQFKRTYQEASRMKGDTGQNLIGLLEQRLDMVVYRAKFAPTIFAARQLVSHGHIRVNGVKCNIASRRVKVGDVISLGNKAKEMALVVEAQGLPERDIPDYVSVDGTDKVTFARVPSLDEVPYPVTMEPNLVVEFYSR*