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scnpilot_p_inoc_scaffold_1007_54

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(57864..58100)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 3.30e-30
Pseudouridine synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3M5_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 1.20e-29
Pseudouridine synthase {ECO:0000313|EMBL:KHL25833.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mer similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 74.0
  • Bit_score: 140
  • Evalue 8.60e-31

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Taxonomy

Kirrobacter mercurialis → Kirrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATCGCCGATCCCGCCCTATGGCCACGCAACCCGCCGATTCGCGTGCGCAAAAGCATTCCCGATAGCTGGCTGCGCCTGACCATTCGCGAAGGCCGCAATCGCCAGGTTCGCCGGATGACAGCGGCCATCGGCAACCCAACCTTGCGATTGGTGCGCTGGAGCATCGGGTCATGGACCCTGGAAGGACTGGCACCCGGCGAATGGCGGGAAATCGCAGGCCCGCTCAACATTCGCTGA
PROTEIN sequence
Length: 79
IADPALWPRNPPIRVRKSIPDSWLRLTIREGRNRQVRRMTAAIGNPTLRLVRWSIGSWTLEGLAPGEWREIAGPLNIR*