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scnpilot_p_inoc_scaffold_1039_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 474..4649

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 999.99
  • Bit_score: 2482
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZY89_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 999.99
  • Bit_score: 2482
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 999.99
  • Bit_score: 2462
  • Evalue 0.0

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4176
ATGGCAAGCAAGGCGAAAGCTCCCGCCATTTCCGGCACCGCCAAGAAGCGCATCCGCAAGATCTTCGGCGACATCCACGAAGTGGTGCAGATGCCGAACCTGATCGAGGTTCAGCGCGAAAGCTACGAGCAGTTCCTGCGTTCGAACAAGGAAACGGGCTATGTCTCGGGCCTTGAGAAGACGCTGCGCTCGGTTTTCCCGATCCGCGACTTTGCCGGCACTGCCGAGCTGGACTTCGTTCATTACGAGCTGGAAGACCCGAAGTACGACACCACCGAGTGCCGTCAGCGCGGGATCACCTATGCTGCCCCGATGAAGGTCACGCTGCGCCTGATCGTGTTCGAAGTGGATGCCGAGACCGAAACCCGCTCCGTCCTCGATATCAAGGAGCAGGACGTCTACATGGGCGACATGCCGCTCATGACCGAGAACGGCACCTTCATCGTCAATGGCACGGAACGCGTGATCGTCAGCCAGATGCACCGTTCGCCGGGTGTGCTGTTCGACCATGACCGCGGCAAGACTCACTCCTCGGGCAAGTTCCTCTTCGCTGCCCGCGTGATCCCCTATCGTGGTTCGTGGCTCGATTTCGAATTCGACGCCAAGGACATCGTGAACGTGCGTATCGACCGCAAGCGCAAGCTGCCGGTCACGTCGCTGCTCTATGCCCTGGGCATGAATGGCGAGGAAATCCTCAACCACTTCTACAACACCATCACCTGGGCCCGCGTTTCGGGCAAGAATGGCGATGGCTGGAAGATCCCCTTCGTGGCCGAGCAATGGCGCGGCCAGAAGCCGGGCTTCGCCCTGATCGACGCCAATACGGGCGAGGAAGTGTTCCCCGCCGGCCAGAAGATCAGCCCGCGCGCCGCCAACAAGGCTGCCAAGGATGGCCTGACCGACCTGTTGATCCCGACCGAGGAAATCTTCGGTCGCTATGCCGCCAATGACATGATCGACGAGTCGACCGGCCGCATCTGGATCGAAGCGGGCGATGAAGTCAGCCCCGAAAACCTCGACATGCTCGACAAGGCCGGCATCGACCGCCTCGACCTGCTCGACATCGATCACGTCAATACCGGCCCCTGGATCCGCAACACGCTGCAGGTCGACAAGGCCGAGAACCGCGACGAAGGCCTTGAAGCAATCTATAAGGTCATGCGTCCTGGCGAACCGCCGACGAAGGAAACCGCCGAAGCCCTGTTCGAAGGCCTGTTCTTCGACGGCGACCGCTATGATCTGTCGGCCGTGGGCCGCGTGAAGCTCAACATGCGCCTTGGCCTCGAATGCGAGGACACGGTCACCACCCTGCGCAGCGAGGACATCCTCGCCGTTGTGAAGGAACTGGTGAACCTCAAGGACGGCAAGGGCGAAGTCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGTTCGGTGGGCGAGCTGCTGGAAAACCAGTATCGCGTCGGCCTGCTGCGCATGGAGCGCGCCGTGAAGGAGCGCATGAGCTCGGTGGACGTTTCCACCGTGATGCCGAACGACCTGATCAACGCCAAGCCCGCCGTGGCCGCGGTGCGCGAGTTCTTCGGTTCCAGCCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAGTCACTCACAAGCGCCGCGTTTCGGCGCTTGGGCCGGGCGGTCTTACCCGTGAGCGCGCAGGCTTCGAAGTCCGCGACGTTCACCCGACCCATTATGGCCGTATCTGCCCGATTGAAACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCGCTGGCCTCGTTCAGCCGGGTGAACAAATACGGCTTCATCGAAACGCCCTATCGCCGCGTGCTGGAAGGCACTGTGACCGGCGAGGTCGTGTATCTTTCCGCCATGGAAGAGCAGAAGCACGCCGTTGCTCAGGCTTCGGCCGAACTCGATGCGAATGGCCGTTTCGTGGAAGATCTCGTCTCCGCCCGTGAAAACGGCGAATTCGTGATGCTGCCGCGCGAACAGATCACGCTGATGGACGTTTCGCCCAAGCAGCTGGTTTCGGTTGCCGCCTCGCTCATTCCCTTCCTGGAAAATGACGACGCCAACCGCGCGCTGATGGGTTCCAACATGCAGCGTCAGGCCGTGCCGCTGGTGAAGGCGGAAGCGCCTTTCGTCGGCACCGGCATGGAAGAAACCGTGGCCCGCGATTCCGGCGCCGCCATTGCCGCGCTGCGCGCTGGCGTGGTGGACCAGGTCGACGCGACCCGTATCGTTATCCGCGCTTCGGGCGATATCGAACCGGGCAAGTCGGGCGTGGACATCTACACGCTGCAGAAGTTCCAGCGTTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGATCTGATCGAAAAGGGCGACATCATCGCCGACGGTCCTTCGACCGAGCTGGGCGAACTGGCGCTGGGCCGCAACGTGCTCGTCGCCTTCATGCCCTGGAACGGCTACAATTACGAAGACTCCATCCTGATCTCCGAGCGGATCGTGAAGGAAGACGTCTTCACCTCGATCCATATCGAGGAATTCGAAGTGATGGCCCGCGACACCAAGCTCGGGCCTGAAGACATCACCCGCGACATCCCGAATGTCGGCGAGGAAGCCCTGCGCAACCTCGACGAAGCGGGCATCGTCTATATCGGCGCGGAAGTTCACCCCGGTGACATCCTCGTCGGCAAGATCACCCCGAAGGGTGAATCGCCGATGACGCCGGAAGAAAAGCTGCTGCGCGCCATCTTCGGTGAAAAGGCCAGCGATGTGCGCGACACTTCGCTCCGCCTGCCGCCGGGCGTTGCCGGTACCATCGTGGAAGTCCGCGTCTTCAACCGCCACGGCATCGAGATCGACGACCGTACCCGCGCGATCCAGAACGAGGAAATCGAACGCCTCCGCAAGGACGCCGAGGACGAACGCGCGATCCTCAACCGTGCGACCTATAACCGCCTGCGCGAAATGCTGGCGGGCCAGGTCGCTTCGGCCGCGCCCAAGGGCATCAAGAAGGGCGTGGAGATCGACGAGGAGCTGCTCGAAAGCGTCGACCGTCACGACTGGTTCAAGTTCGCAGTCGCCGATGACACTCGCCAGAGCCAGCTGGAAGCCGTTAAGGCCCAGTATGACGAGGCAGTGAAGGTCATCAACGACAAGTTCGAGGACCGCCGCGAGAAGCTGGAACGGGGCGACGAACTCGCACCGGGCGTGCTCAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGTAACAAGGGCATCATCAGCCGCATTCTGCCGGCCGAAGACATGCCCTTCCTTGAAGACGGTACTCCGGTGGACTTCGTGCTGAACCCGCTGGGTGTGCCTTCGCGTATGAACGTCGGCCAGATCTTCGAAACCCATCTGGGCTGGGCCGCACGCGGTCTCGGTCGCAAGATCGGCGATGCTCTGGACGCATGGCGTGAAGCCAATCCGAACCCCGAAGCCGGCGCGCCGCCGGAAGCGGTCAAGGAACTGCTCAAGGAAGTCTACGGCTCGAACTACTCTGACGAGATCGAGAGCCGCGGCACCGACGCCATCGTGGAACTGGCACAGAACGTCCGCAACGGCGTGCCCATGGGCTCTCCGGTGTTCGACGGCGCGGTGGAAGCCGACGTTTCGGCAATGCTCCGCATGGCCGGGCTGGACGAATCCGGGCAGGTCACCCTGCTCGATGGCCGTACCGGCGAGGCGTTCGACCGCAAGGTCACCGTCGGCTGCAAGTATGTCCTGAAGCTGCACCACCTTGTCGATGACAAGATCCACGCCCGTTCGATCGGCCCCTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCCCAGTTCGGTGGCCAGCGCTTCGGGGAAATGGAGGTCTGGGCCCTGCAGGCTTACGGCGCTGCCTATACGCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGGTCGGCCGCACCAAGGTCTATGACGCCATCGTCAAGGGTGACGATACGTTCGAGGCCGGCATTCCGGAAAGCTTCAACGTGCTCGTCAAGGAAATGCGCAGCCTTGGCCTCAATGTCGAACTCAAGTCGGTTGAAGACGAAGAGGACGACGAAGGTTTCGCCGAGGCGGCGGAGTGA
PROTEIN sequence
Length: 1392
MASKAKAPAISGTAKKRIRKIFGDIHEVVQMPNLIEVQRESYEQFLRSNKETGYVSGLEKTLRSVFPIRDFAGTAELDFVHYELEDPKYDTTECRQRGITYAAPMKVTLRLIVFEVDAETETRSVLDIKEQDVYMGDMPLMTENGTFIVNGTERVIVSQMHRSPGVLFDHDRGKTHSSGKFLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGMNGEEILNHFYNTITWARVSGKNGDGWKIPFVAEQWRGQKPGFALIDANTGEEVFPAGQKISPRAANKAAKDGLTDLLIPTEEIFGRYAANDMIDESTGRIWIEAGDEVSPENLDMLDKAGIDRLDLLDIDHVNTGPWIRNTLQVDKAENRDEGLEAIYKVMRPGEPPTKETAEALFEGLFFDGDRYDLSAVGRVKLNMRLGLECEDTVTTLRSEDILAVVKELVNLKDGKGEVDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIETPYRRVLEGTVTGEVVYLSAMEEQKHAVAQASAELDANGRFVEDLVSARENGEFVMLPREQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGTGMEETVARDSGAAIAALRAGVVDQVDATRIVIRASGDIEPGKSGVDIYTLQKFQRSNQNTCINQRPLVKVGDLIEKGDIIADGPSTELGELALGRNVLVAFMPWNGYNYEDSILISERIVKEDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVHPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGIEIDDRTRAIQNEEIERLRKDAEDERAILNRATYNRLREMLAGQVASAAPKGIKKGVEIDEELLESVDRHDWFKFAVADDTRQSQLEAVKAQYDEAVKVINDKFEDRREKLERGDELAPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGIISRILPAEDMPFLEDGTPVDFVLNPLGVPSRMNVGQIFETHLGWAARGLGRKIGDALDAWREANPNPEAGAPPEAVKELLKEVYGSNYSDEIESRGTDAIVELAQNVRNGVPMGSPVFDGAVEADVSAMLRMAGLDESGQVTLLDGRTGEAFDRKVTVGCKYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYDAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELKSVEDEEDDEGFAEAAE*