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scnpilot_p_inoc_scaffold_952_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1666..2424)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0E6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 252.0
  • Bit_score: 464
  • Evalue 7.80e-128
  • rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 252.0
  • Bit_score: 464
  • Evalue 1.10e-127
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 252.0
  • Bit_score: 458
  • Evalue 9.30e-127

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCGCACAGGCGTGATCGCTAAGAAAGTCGGGATGACCCGCCTGTTCCAGGAGGATGGACGTCACGTTCCCGTGACCGTTCTTGCCCTGGAAGACTGCCAGGTGGTTTCGGTCCGTACCCAGGAGAACGATGGTTACACCGCTCTCCAGGTCGGTTCGGGTGAAGCCAAGCAGAAGAACGTTGCCAAGCCGCAGCGTGAACATTTCGCCAAGGCTGAAGTGTCGCTCAAGATGAAGGTTGCGGAATTCCGCGTCGCTGAAGATGCGGTGCTGGAAGTCGGCTCCACGATCGCTGCCTCGCACTTCGTGCCGGGCCAGCTGGTCGACATCACCGGCCACACGCAGGGCAAGGGCTTTGCCGGTGCGATGAAGCGCTGGGGTTTCGGCGGTATGCGCGCCACCCACGGCGTTTCCATCAGCCACCGCGCCCATGGTTCGACCGGTAACCGTCAGGATCCGGGTCGCGTGTTCAAGGGCAAGAAGATGGCCGGCCACATGGGCGACCGTCAGCGCACTCAGCAGAACCTCGAAATCGTCCGCACGGATGATGAGCGCGGGCTGATCTTCGTGAAGGGCTCGGTGCCCGGTTCGAAGAACGCCTGGCTGCTCGTTCGCGACTCCGTGAAGGTTTCGCGCCACGCCGAGGCTCCCTATCCCGCCGGGCTGAAGAGCGCGGCCAACAGCAATGACGCGGCGCCCGCCGACACTCCGGCTGAAGAAGCCGTGGCTGTCGAGGCGACCGAAGGCCAGGAGGGCTAA
PROTEIN sequence
Length: 253
MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSVRTQENDGYTALQVGSGEAKQKNVAKPQREHFAKAEVSLKMKVAEFRVAEDAVLEVGSTIAASHFVPGQLVDITGHTQGKGFAGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIVRTDDERGLIFVKGSVPGSKNAWLLVRDSVKVSRHAEAPYPAGLKSAANSNDAAPADTPAEEAVAVEATEGQEG*