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scnpilot_p_inoc_scaffold_952

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_952_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..719)
DNA (717bp) protein (239aa)
50S ribosomal protein L2 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIQ6_9SPHN
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
rplB; 50S ribosomal protein L2
scnpilot_p_inoc_scaffold_952_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(732..1043)
DNA (312bp) protein (104aa)
50S ribosomal protein L23 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y529_9SPHN
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
50S ribosomal protein L23
scnpilot_p_inoc_scaffold_952_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1036..1662)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=2 Tax=Novosphingobium RepID=F6IMC0_9SPHN rbh
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_952_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1666..2424)
DNA (759bp) protein (253aa)
50S ribosomal protein L3 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0E6_9SPHN rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rplC; 50S ribosomal protein L3
scnpilot_p_inoc_scaffold_952_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2680..2991)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZS93_9SPHN
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
rpsJ; 30S ribosomal protein S10
scnpilot_p_inoc_scaffold_952_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3151..4326)
DNA (1176bp) protein (392aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIR2_9SPHN rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacte
scnpilot_p_inoc_scaffold_952_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4417..6510)
DNA (2094bp) protein (698aa)
Elongation factor G n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y533_9SPHN rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
fusA; elongation factor G
scnpilot_p_inoc_scaffold_952_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6630..7100)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ87_9SPHN
30S ribosomal protein S7 {ECO:0000313|EMBL:AKH41141.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altere
30S ribosomal protein S7
scnpilot_p_inoc_scaffold_952_9
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7273..7644)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=2 Tax=Erythrobacter RepID=RS12_ERYLH
rpsL; 30S ribosomal protein S12
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_p_inoc_scaffold_952_10
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8193..8948)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V395_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ06952.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfold
hypothetical Protein
scnpilot_p_inoc_scaffold_952_11
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8945..9541)
DNA (597bp) protein (199aa)
3-hydroxydecanoyl-ACP dehydratase {ECO:0000313|EMBL:EAQ06953.1}; EC=4.2.1.59 {ECO:0000313|EMBL:EAQ06953.1};; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V396_9RHOB
scnpilot_p_inoc_scaffold_952_12
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10215..10934)
DNA (720bp) protein (240aa)
Calcium-binding ef-hand protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L6X1_9SPHN
Calcium-binding ef-hand protein {ECO:0000313|EMBL:EIZ80189.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
scnpilot_p_inoc_scaffold_952_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11018..11533)
DNA (516bp) protein (172aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=627192 species="Bacteria; Proteobacteria; Alphapr
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ86_9SPHN
putative peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_952_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11620..12408)
DNA (789bp) protein (263aa)
LysR family transcriptional regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9A0_ERYLH rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:AKH41137.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythr
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_952_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12490..12900)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WB18_9SPHN
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
apaG; ApaG protein
scnpilot_p_inoc_scaffold_952_16
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12956..13276
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035ECE98
Uncharacterized protein {ECO:0000313|EMBL:KCZ56841.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
Excalibur
scnpilot_p_inoc_scaffold_952_17
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13336..13821
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MFX1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKC26150.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
scnpilot_p_inoc_scaffold_952_18
unknown

Not on your lists

comp(13785..14402)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_952_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14509..15717)
DNA (1209bp) protein (403aa)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AKH42208.1}; EC=2.5.1.- {ECO:0000313|EMBL:AKH42208.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Ery
Cystathionine gamma-synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ81_9SPHN rbh
metB; cystathionine gamma-synthase
scnpilot_p_inoc_scaffold_952_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15806..17107
DNA (1302bp) protein (434aa)
Putative dolichyl-phosphate-mannose--protein mannosyltransferase {ECO:0000313|EMBL:AKH42210.1}; EC=2.4.1.109 {ECO:0000313|EMBL:AKH42210.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaprote
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDT4_9SPHN rbh
hypothetical protein
scnpilot_p_inoc_scaffold_952_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17117..17299)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003602DD4
Uncharacterized protein {ECO:0000313|EMBL:AKH42211.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_952_22
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17422..18546)
DNA (1125bp) protein (375aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Dolichol monophosphate mannose synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HGD6_9SPHN
Dolichol monophosphate mannose synthase {ECO:0000313|EMBL:EQB12082.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
scnpilot_p_inoc_scaffold_952_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18557..19615)
DNA (1059bp) protein (353aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:AKH42213.1}; EC=1.1.1.85 {ECO:0000313|EMBL:AKH42213.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0G1_9SPHN rbh
scnpilot_p_inoc_scaffold_952_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20214)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N981_ERYLH
DNA repair protein RecO {ECO:0000313|EMBL:AKH42214.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_952_25
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20313..20801
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000369BAE3
Uncharacterized protein {ECO:0000313|EMBL:KGB52532.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_p_inoc_scaffold_952_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..21089)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VHM4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS44099.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_952_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21163..21411)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48255.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_952_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21449..22003)
DNA (555bp) protein (185aa)
CrtK protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E74C
TspO/MBR family protein {ECO:0000313|EMBL:AKH42217.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
TspO and MBR like proteins
scnpilot_p_inoc_scaffold_952_29
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22141..22878)
DNA (738bp) protein (246aa)
Putative hemolysin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJA2_9SPHN rbh
Putative hemolysin {ECO:0000313|EMBL:GAD48257.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
putative hemolysin
scnpilot_p_inoc_scaffold_952_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22944..23504
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N976_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH42219.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
Displaying items 1-30 of 41 in total

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