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scnpilot_p_inoc_scaffold_952_14

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(11620..12408)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9A0_ERYLH similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 263.0
  • Bit_score: 391
  • Evalue 8.80e-106
  • rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:AKH41137.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythr similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 264.0
  • Bit_score: 405
  • Evalue 6.30e-110
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 263.0
  • Bit_score: 391
  • Evalue 2.50e-106

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAAGCGCACGCATCTGCCCCTTAACGCCCTGCGCGTGTTCGATGCCGCCGCGCGGCACCTGTCCTTCACCCGCGCTGCGGACGAGCTGGCGGTGACTCCCGCCGCGGTCGGCCAGCAGATTCGCGCGCTGGAGGATGTGCTGGGCGTCGTCCTGTTTCGCCGCACCTCCAAGGGGCTGGAGCTGACGGACGAGGCCGTGGCCGGGCTCGACACTCTGCGCGAAGGCTTCCTCCGCTTCGAGGAGAGCGTGCAGGCCATGCAGGCCGGGCAGTCCAGCTATTCCTATGCCATTGCCGCCCCGCATGAATTCTGGGCCAGCTGGCTTGCCCCGCGCCTCGCCGCCTTCCGCAAGGAGAACCCGGAGATCCGCTATCAGCTGATCGCGGGGGAGGAAGTGGACTTCACCGAGGCCAATCTCGATATCGCGATCCGCCTGGCGGAAGGTCCGGGCGATCTGGAAGGGCTCCAGCTTGCCCCCGCCATGCGGGTGGTGGTCGCCGCCGATGGCGCCCCGGACGATTGGATCGCCTGGCCCGGCGCTCCCCTGCCCGATGGGGCGGAGGCAGTGCTGCAGGTCGGCAATGCGGCGCAGGCGCTGGCCAGCGCGCGGGCAGGGCTGGGCAAGGCCATGCTGCCGCTGCTGCTGGTGGAAGAGGCGCTGGCCGATGGCCGGCTGAAGGCGCTGCAAGGGCCGGAACCGGGCCACCGCGCCTATTGGCTCGTCGCTCCCCGCCCGCAATGGCGCCAGAAGAAAGTGCGCCAGCTAGTAGACTTCCTAACGTCTTGA
PROTEIN sequence
Length: 263
MKRTHLPLNALRVFDAAARHLSFTRAADELAVTPAAVGQQIRALEDVLGVVLFRRTSKGLELTDEAVAGLDTLREGFLRFEESVQAMQAGQSSYSYAIAAPHEFWASWLAPRLAAFRKENPEIRYQLIAGEEVDFTEANLDIAIRLAEGPGDLEGLQLAPAMRVVVAADGAPDDWIAWPGAPLPDGAEAVLQVGNAAQALASARAGLGKAMLPLLLVEEALADGRLKALQGPEPGHRAYWLVAPRPQWRQKKVRQLVDFLTS*