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scnpilot_p_inoc_scaffold_1706_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 3..380

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDB4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 249
  • Evalue 1.50e-63
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 249
  • Evalue 2.10e-63
rimP; Ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 125.0
  • Bit_score: 226
  • Evalue 5.00e-57

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
TCGCGCCGCATTTCGGACCGGCTCGACGCGCTAGAGGAAGCGGGCGAGGATCCGATCGAGGGCGCCTATCGCCTCGAAGTGTCGTCGCCCGGGATCGACCGCCCGCTGACGCGTCCCGCCGACTTCGCCGACTGGGCGGGGCATGAGGCGAAGGTCGCGCTGAAGGAAAAGCGCGACGGGCGCCTGCGCTTCAACGGCGAACTCGCCGGCATCGACGCCGGCATCGTCACGATTTTCGACAAGGAAGGGGTCGAGCACAAGCTGCCGTTCGATGCGATCGATACGGCCAAGCTCGTCCTTACCGACAAATTGATTGCCGCAACCGTCCCGCTCTCGATCGAGGGTGCCGACGACATGGAAGAAGAAGGACAGGACTGA
PROTEIN sequence
Length: 126
SRRISDRLDALEEAGEDPIEGAYRLEVSSPGIDRPLTRPADFADWAGHEAKVALKEKRDGRLRFNGELAGIDAGIVTIFDKEGVEHKLPFDAIDTAKLVLTDKLIAATVPLSIEGADDMEEEGQD*