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scnpilot_p_inoc_scaffold_1706_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 380..2032

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor NusA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2H5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 550.0
  • Bit_score: 993
  • Evalue 1.10e-286
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 550.0
  • Bit_score: 993
  • Evalue 1.50e-286
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 554.0
  • Bit_score: 948
  • Evalue 8.40e-274

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGGCCACTGCCATTTCCGCCAACAAGGCCGAACTGCTCGCGATCGCCAACAGCGTCGCCAGCGAGAAGATGATCGACAAGGGCATCGTCATCGAGGCCATCGAGGAAGCGATCCAGCGCGCCGCCCGCGCCCGCTACGGCGCCGAGAACGACATCCGCGCCAAGCTCGACGCGCAGACCGGCGACCTTCGCCTGTGGCGCGTCGTCGAGGTGGTCGAACAGGTCGACGATTATTTCAAGCAGGTCGACCTTGCCGCCGGCCAGAAGCTGCAGAAGGATGCGAAGGTCGGCGACTTCATCGTCGATCCGCTGCCCGCGGTCGACCTCGGCCGCATCGACGCCCAGTCGGCGAAGCAGGTGATCTTCCAGAAGGTCCGCGAAGCCGACCGCGAGCGCCAGTTCGAGGAATATAAGGACCGCGCGGGCGAGATCATCACCGGCGTCGTCAAGTCGGTCGAATTCGGCCACATCGTCGTCAACCTGGGCCGCGCCGAAGGCGTGATCCGCCGCGACCAGCAGATCCCGCGCGAACTGATGCGCGTCGGCGATCGCGTCCGCGCGCTGATCCTGTCGGTGCGCCGCGAAAATCGCGGACCGCAGATTTTCCTCAGCCGCGCGCACCCCGACTTCATGAAGAAGCTGTTCGCGCAGGAAGTCCCCGAAATCTACGATGGCATCATCGAGATCAAGGCCGCGGCGCGCGATCCGGGCAGCCGCGCCAAGATCGGTGTCATCAGCTATGACGGCTCGATCGACCCCGTCGGCGCGTGCGTCGGCATGAAGGGCAGCCGCGTTCAGGCGGTCGTCCAGGAAATGCAGGGCGAAAAGATCGACATCATTCCCTGGTCGGAAGACACCGCGACCTTCGTCGTCAACGCGCTGCAGCCCGCGACGGTGCAGCGCGTCGTCATCGACGAAGATGACGGCCGTATCGAAGTCGTCGTTCCCGACGATCAGCTCAGCCTTGCCATCGGCCGCCGCGGCCAGAACGTCCGTCTCGCCAGCCAGCTGACCGGCAAGCAGATCGACATCATGACCGAGGCCGACGCGAGCGAAAAGCGCCAGCGCGAATTCGTCGAACGCTCGACGATGTTCCAGGAAGAACTCGACGTCGACGAAACGCTCGCGCAGTTGCTCGTTGCCGAAGGCTTCGGCGAACTCGAAGAAGTCGCTTATGTGCCGCTCGACGAACTGGCGAGCATCGAAGGCTTCGACGACGAACTGGCCGAAGAGCTGCAGAGCCGTGCGACCGAGGCGCTCGAACGCCGCGAAGAAGCCGCGCGCCAGGAACGCCGCGGGCTTGGCGTCGAGGATGATCTGGCCGAACTGCCGCACCTGACCGAAGCGATGCTCGTCACGCTCGGCAAGGCCGGGATCAAGACGCTGGATGATCTGGCCGACCTCGCGACGGACGAACTCATTGCCAAGAAGCGCAACGAGCCGCGCCGCCGTGGCGATGGCCCGCAGACGCGCCGTCCCGGTCAGCGTACCGAGGACAAGGCAGGCGTGCTGGGCGAATATGGCCTGACCGAAGAGCAGGGCAACGAGATCATCATGGCTGCCCGCGCCCACTGGTTTGAAGATGAAGAACCGGCAGCCGCTGCCGGGGCCGACAATTCTGGGGAGGCCGCCGATGCGGACACCCCGCAATGA
PROTEIN sequence
Length: 551
MATAISANKAELLAIANSVASEKMIDKGIVIEAIEEAIQRAARARYGAENDIRAKLDAQTGDLRLWRVVEVVEQVDDYFKQVDLAAGQKLQKDAKVGDFIVDPLPAVDLGRIDAQSAKQVIFQKVREADRERQFEEYKDRAGEIITGVVKSVEFGHIVVNLGRAEGVIRRDQQIPRELMRVGDRVRALILSVRRENRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRAKIGVISYDGSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPATVQRVVIDEDDGRIEVVVPDDQLSLAIGRRGQNVRLASQLTGKQIDIMTEADASEKRQREFVERSTMFQEELDVDETLAQLLVAEGFGELEEVAYVPLDELASIEGFDDELAEELQSRATEALERREEAARQERRGLGVEDDLAELPHLTEAMLVTLGKAGIKTLDDLADLATDELIAKKRNEPRRRGDGPQTRRPGQRTEDKAGVLGEYGLTEEQGNEIIMAARAHWFEDEEPAAAAGADNSGEAADADTPQ*