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scnpilot_p_inoc_scaffold_1400_13

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(9997..10443)

Top 3 Functional Annotations

Value Algorithm Source
ribosome-associated protein IOJAP n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60AC4 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 140.0
  • Bit_score: 203
  • Evalue 1.90e-49
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 140.0
  • Bit_score: 202
  • Evalue 3.50e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 119.0
  • Bit_score: 193
  • Evalue 4.30e-47

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAATCAGGCGCAGACCTCGCCGGCTAGTACCGGCGCTTCTCAAGCCAGCCCCCAGGCTGGCCCGATACCTGCCACAGGCGGCAAGCTGGCCAGCGACGCTGAACGGCTGCACGCTCTCGTCCTCCAGTCGCTGGACGATGATCAGGCACAGGATGTGATCTCGATCCCGCTGGAAGGGAAGTCGAGCATTGCCGATTATATGGTGATCGCATCTGGCCGTTCGACCCGTCAGGTTGCTGCCATGGCCCAGAAGCTGGGCGAGCGAGTAAAGCAGGCGGGTTTCGGTTCCGCTCGGATCGAAGGCCTGCCGGCCGCGGACTGGGTGCTGATCGATGCCGGGGACGTGGTGGTGCATCTCTTCCGTCCGGAAGTGCGCAGCTTCTACAATCTCGAACGCATGTGGGCCTTTGGCGACGCTCCGCCGGTTGCGGCCGGGCAAGCGTAA
PROTEIN sequence
Length: 149
MNQAQTSPASTGASQASPQAGPIPATGGKLASDAERLHALVLQSLDDDQAQDVISIPLEGKSSIADYMVIASGRSTRQVAAMAQKLGERVKQAGFGSARIEGLPAADWVLIDAGDVVVHLFRPEVRSFYNLERMWAFGDAPPVAAGQA*