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scnpilot_p_inoc_scaffold_1400

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1400_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..300
DNA (300bp) protein (100aa)
Curved DNA-binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKX5_9SPHN
Curved DNA-binding protein {ECO:0000313|EMBL:GAD48982.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
molecular chaperone DnaJ
scnpilot_p_inoc_scaffold_1400_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300..1256
DNA (957bp) protein (319aa)
Conserved hypothetical membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6B7_ERYLH rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH43383.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1400_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1306..2109
DNA (804bp) protein (268aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKB0_9SPHN rbh
enoyl-ACP reductase
scnpilot_p_inoc_scaffold_1400_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2196..2594
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUC6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48979.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1400_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2591..3901)
DNA (1311bp) protein (437aa)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2J6_9SPHN rbh
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase {ECO:0000313|EMBL:GAD48978.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
UDP-glucose/GDP-mannose dehydrogenase
scnpilot_p_inoc_scaffold_1400_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3978..5105)
DNA (1128bp) protein (376aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AKH43380.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AKH43380.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; E
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKX1_9SPHN rbh
UDP-N-acetylglucosamine 2-epimerase
scnpilot_p_inoc_scaffold_1400_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5154..5735)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCC2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS42498.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_1400_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5856..6371)
DNA (516bp) protein (172aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rul
Putative ubiquinone biosynthesis monooxygenase Coq7 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKA6_9SPHN
ubiquinone biosynthesis protein
scnpilot_p_inoc_scaffold_1400_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6371..6847)
DNA (477bp) protein (159aa)
Putative oxidoreductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUC1_9SPHN
Putative oxidoreductase {ECO:0000313|EMBL:GAD48974.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
disulfide bond formation protein
scnpilot_p_inoc_scaffold_1400_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6865..8202)
DNA (1338bp) protein (446aa)
Carboxy-terminal-processing protease n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2J1_9SPHN rbh
Carboxy-terminal-processing protease {ECO:0000313|EMBL:GAD48973.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
periplasmic protease
scnpilot_p_inoc_scaffold_1400_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..9543)
DNA (1221bp) protein (407aa)
Peptidase M23 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKW8_9SPHN rbh
Peptidase M23 family protein {ECO:0000313|EMBL:GAD48972.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
hypothetical protein
scnpilot_p_inoc_scaffold_1400_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9547..9969)
DNA (423bp) protein (141aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y709_9SPHN
hypothetical protein
scnpilot_p_inoc_scaffold_1400_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9997..10443)
DNA (447bp) protein (149aa)
ribosome-associated protein IOJAP n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60AC4
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_1400_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10499..11176)
DNA (678bp) protein (226aa)
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:AKH43372.1}; EC=2.7.7.18 {ECO:0000313|EMBL:AKH43372.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUB7_9SPHN rbh
scnpilot_p_inoc_scaffold_1400_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11173..12225)
DNA (1053bp) protein (351aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:AKH43371.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH43371.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
aldo/keto reductase n=1 Tax=Martelella mediterranea RepID=UPI00037B3F69
aldo/keto reductase
scnpilot_p_inoc_scaffold_1400_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12302..13594)
DNA (1293bp) protein (431aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2I5_9SPHN
scnpilot_p_inoc_scaffold_1400_17
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13843..14985
DNA (1143bp) protein (381aa)
Peptidase M23 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKW6_9SPHN rbh
Peptidase M23 family protein {ECO:0000313|EMBL:GAD48967.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
peptidase M23/M37
scnpilot_p_inoc_scaffold_1400_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14927..15388
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y706_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48966.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1400_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15414..17135)
DNA (1722bp) protein (574aa)
long-chain acyl-CoA synthetase (EC:6.2.1.3)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK97_9SPHN rbh
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:GAD48965.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
scnpilot_p_inoc_scaffold_1400_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17289..17993)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUB2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH43367.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
cytoplasmic protein
scnpilot_p_inoc_scaffold_1400_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18108..19169)
DNA (1062bp) protein (354aa)
GDP-mannose-dependent alpha-mannosyltransferase {ECO:0000313|EMBL:AKH43366.1}; EC=2.4.1.- {ECO:0000313|EMBL:AKH43366.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingom
Putative glycosyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2I1_9SPHN rbh
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_1400_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19198..20103)
DNA (906bp) protein (302aa)
phosphoesterase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0856 rbh
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:AKH43365.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sou
hypothetical protein
scnpilot_p_inoc_scaffold_1400_23
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20213..20830)
DNA (618bp) protein (206aa)
Glutathione S-transferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBK6_9SPHN rbh
Glutathione S-transferase {ECO:0000313|EMBL:EHJ61288.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
glutathione S-transferase
scnpilot_p_inoc_scaffold_1400_24
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20823..21407)
DNA (585bp) protein (195aa)
Putative oxidoreductase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK92_9SPHN
NADPH quinone oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
NAD(P)H-quinone oxidoreductase
Displaying 24 items

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