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scnpilot_p_inoc_scaffold_1837_21

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(18897..19781)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II43_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 294.0
  • Bit_score: 436
  • Evalue 2.70e-119
  • rbh
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 294.0
  • Bit_score: 445
  • Evalue 6.20e-122
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 294.0
  • Bit_score: 436
  • Evalue 7.50e-120

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Taxonomy

R_Erythrobacter_63_10 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCTACACGTCGCCTCCCTCCTCTCCGCGCGCTCGAAGCGTTTGTGCGCATCGTTCGCATGGGTTCCGCCCGTGCGGCGGCGAATGAGCTTGGCCTCTCGCCGTCGGCCTTGTCGCGCCGCGTGACGAGCCTTGAGGAATTCGTCGGCAAGAAACTGTTCACCCGCGCGCATCAGGCGATGAAACTCACCGATGACGGGCGCGCCTTCTACGAGGCGATCAATCCGCATCTGGAGGCACTGGCACAGGCTGTGGAAGCGCAGTCGGAAAACCTCCAGCTTCTGCGCCTGCATCTGGGTGTTTCGCCGCTGTTCGGCAGCCAGCGGCTGTTCCCGCGCCTGCTGGAACTGCGCAAACTGCACCCGCGCCTGCATATCGACATCGATACCGGGCCGAACCTGCTCGGCCGTGTGGGCGATACGCTGGATGCGGCCGTGATCGTCACCTCCGATCCGGATGATTCCTATTACTCGGTGCGGCTGGACCATAACCGCGTCCACGCCATCTGCAGCGAGGCGCTTGCTCAGGAAATCGGGCTGTCGCCGGATATCGAAACGCTCTCCAAGCAGACCTTCCTGATCCATAACGACCTGCCCGAAAGCTTCGAGGCATGGAAGGAAGCACTGGGTTTCCAGGGGCTGCAGCCCGCCGCGATCGACCATTTCGATTCCGGGCAGCTGATGCTGGAAGCCGCCGCTCAGGGTCTGGGCATCGCCATCATGCATGACGATCACTTCCGCCGCGCAACCGGCAAGAAGCTGGCCCAGCTCTATGACATCGAAGTGGAAAGCCCCTATTCCTACTGGTTCGTCTGCCGCCCCAAGGCGCTCGATACCAGGCCGGTGAAGCTGTTCCACGACTGGATGATCGAATCCGGTCTTTAA
PROTEIN sequence
Length: 295
MATRRLPPLRALEAFVRIVRMGSARAAANELGLSPSALSRRVTSLEEFVGKKLFTRAHQAMKLTDDGRAFYEAINPHLEALAQAVEAQSENLQLLRLHLGVSPLFGSQRLFPRLLELRKLHPRLHIDIDTGPNLLGRVGDTLDAAVIVTSDPDDSYYSVRLDHNRVHAICSEALAQEIGLSPDIETLSKQTFLIHNDLPESFEAWKEALGFQGLQPAAIDHFDSGQLMLEAAAQGLGIAIMHDDHFRRATGKKLAQLYDIEVESPYSYWFVCRPKALDTRPVKLFHDWMIESGL*