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scnpilot_p_inoc_scaffold_1837

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1837_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..320)
DNA (318bp) protein (106aa)
glutamate--cysteine ligase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD05E8
Glutamate--cysteine ligase {ECO:0000313|EMBL:EQB15825.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
glutamate--cysteine ligase
scnpilot_p_inoc_scaffold_1837_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373..1122)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECU3_9SPHN rbh
16S rRNA methyltransferase
scnpilot_p_inoc_scaffold_1837_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1139..2539)
DNA (1401bp) protein (467aa)
Peptidase, M20/M25/M40 family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCW0_PHEZH rbh
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1837_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2686..3603
DNA (918bp) protein (306aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AKH42294.1}; EC=2.5.1.- {ECO:0000313|EMBL:AKH42294.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C617_9SPHN rbh
ubiA; 4-hydroxybenzoate polyprenyltransferase
scnpilot_p_inoc_scaffold_1837_5
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3718..4104)
DNA (387bp) protein (129aa)
Glyoxalase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSX4_9SPHN
Glyoxalase {ECO:0000313|EMBL:EZP81654.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovor
glyoxalase
scnpilot_p_inoc_scaffold_1837_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4249..4689
DNA (441bp) protein (147aa)
Transcriptional regulator, MerR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9S4_NOVAD
MerR family transcriptional regulator {ECO:0000313|EMBL:KHS48162.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_1837_7
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5136
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W0Q5_METEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY29161.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_p_inoc_scaffold_1837_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5149..8574)
DNA (3426bp) protein (1142aa)
Chromosome partition protein Smc n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZW4_9SPHN rbh
Chromosome partition protein Smc {ECO:0000313|EMBL:AKH42288.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
chromosome segregation protein
scnpilot_p_inoc_scaffold_1837_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8597..9358)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIU4_9SPHN
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:AKH42287.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alter
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_1837_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9458..9976)
DNA (519bp) protein (173aa)
Protein-disulfide isomerase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VFR8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42286.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_1837_11
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9973..10569)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N932_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC63809.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_1837_12
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10599..11624
DNA (1026bp) protein (342aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
adenine glycosylase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DEA8 rbh
Adenine glycosylase {ECO:0000313|EMBL:KEO87638.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp.
scnpilot_p_inoc_scaffold_1837_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11919..12140)
DNA (222bp) protein (74aa)
membrane protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D55683
Uncharacterized protein {ECO:0000313|EMBL:AKH42283.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1837_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12284..13615
DNA (1332bp) protein (444aa)
Beta-lactamase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N935_ERYLH rbh
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:GAO57051.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
beta-lactamase
scnpilot_p_inoc_scaffold_1837_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14502
DNA (891bp) protein (297aa)
NADH pyrophosphatase {ECO:0000313|EMBL:AKH42281.1}; EC=3.6.1.22 {ECO:0000313|EMBL:AKH42281.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterace
NAD+ diphosphatase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C4Z4_9SPHN rbh
NUDIX hydrolase
scnpilot_p_inoc_scaffold_1837_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14499..15191
DNA (693bp) protein (231aa)
Hypothetical 2-hydroxychromene-2-carboxylateisomerase family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PBU8_9SPHN
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:AKH42280.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" so
2-hydroxychromene-2-carboxylate isomerase
scnpilot_p_inoc_scaffold_1837_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15291..16403
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMI8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE76543.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
scnpilot_p_inoc_scaffold_1837_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16420..16818)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIB4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48060.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1837_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16820..18256)
DNA (1437bp) protein (479aa)
Magnesium transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRR4_9SPHN rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
magnesium transporter
scnpilot_p_inoc_scaffold_1837_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18352..18801
DNA (450bp) protein (150aa)
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZV4_9SPHN
Putative peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:GAD48058.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
cyclophilin type peptidyl-prolyl cis-trans isomerase
scnpilot_p_inoc_scaffold_1837_21
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18897..19781)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II43_9SPHN rbh
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1837_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19867..20799)
DNA (933bp) protein (311aa)
Putative hemolysin n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4N7_9SPHN
Hemolysin C {ECO:0000313|EMBL:AKH42271.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter
cobalt transporter
scnpilot_p_inoc_scaffold_1837_23
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..21311)
DNA (492bp) protein (164aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1348853 species="Bacteria; P
Endoribonuclease YbeY n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZP69_9SPHN
rRNA maturation factor
scnpilot_p_inoc_scaffold_1837_24
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21352..22386)
DNA (1035bp) protein (345aa)
PhoH-like protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WF83_9SPHN rbh
PhoH-like protein {ECO:0000313|EMBL:EIZ78881.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
PhoH
scnpilot_p_inoc_scaffold_1837_25
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22765..23079
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHE4_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG75386.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
scnpilot_p_inoc_scaffold_1837_26
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24474..25220
DNA (747bp) protein (249aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:AKH42267.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH42267.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; S
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D1S8_SPHYA rbh
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_1837_27
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25249..26583)
DNA (1335bp) protein (445aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZU9_9SPHN rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_p_inoc_scaffold_1837_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26657..27415)
DNA (759bp) protein (253aa)
Lyso-ornithine lipid acyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9P5_NOVAD
lyso-ornithine lipid acyltransferase
Lyso-ornithine lipid acyltransferase {ECO:0000313|EMBL:ABD25428.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
scnpilot_p_inoc_scaffold_1837_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27431..27553)
DNA (123bp) protein (41aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWA1_9SPHN
Ferric uptake regulation protein {ECO:0000313|EMBL:AKH42264.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
Fur family transcriptional regulator
scnpilot_p_inoc_scaffold_1837_30
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27730..28170)
DNA (441bp) protein (147aa)
MucR family transcriptional regulator n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8G5_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:KHK92962.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
transcriptional regulator
Displaying items 1-30 of 44 in total

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