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scnpilot_p_inoc_scaffold_1837_23

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(20820..21311)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1348853 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 163.0
  • Bit_score: 260
  • Evalue 2.00e-66
Endoribonuclease YbeY n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZP69_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 162.0
  • Bit_score: 259
  • Evalue 3.20e-66
rRNA maturation factor similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 161.0
  • Bit_score: 250
  • Evalue 2.50e-64

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGGAACTCGAAATCGACATAGAAGACCCATGGCCATCCGGCGACTGGGAAGAACTAGCTGAAACCGCCGCGCAGGCCCTGGCCGAGGTTGCGCCGGAGCTGGGCAATCCGCGCCTTTGCGTCAGCCTGATCTTCACCTCCGACGAGGAAATCCACACGCTCAACCGCGAGTGGCGCCAGCGTGACAAACCGACCAATGTGCTCTCCTTCCCCATGCTGGAGCGGGAAGACCTGCTGGAGCTTGCGCCAGAGGGCCCGCCCGAATTGCTGGGCGACATCGCCCTCGCCCATGAAACATGCGCGTGTGAAGCGGCGGAAAAGGGTGTTCCGCTGGAGCATCACGCGGCCCATCTGATCGTCCATGGTCTGCTGCATCTTGCCGGTCATGATCATGAAATATCACCGGCCGATGCGGACGCTATGGAAGCGCTGGAAACAAAGGCGCTTGCGCTAATGGGAATTGCAGACCCATATGGCGACCGCGAGCAATGA
PROTEIN sequence
Length: 164
VELEIDIEDPWPSGDWEELAETAAQALAEVAPELGNPRLCVSLIFTSDEEIHTLNREWRQRDKPTNVLSFPMLEREDLLELAPEGPPELLGDIALAHETCACEAAEKGVPLEHHAAHLIVHGLLHLAGHDHEISPADADAMEALETKALALMGIADPYGDREQ*