ggKbase home page

scnpilot_p_inoc_scaffold_1897_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 7102..7734

Top 3 Functional Annotations

Value Algorithm Source
Putative site-specific recombinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ93_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 210.0
  • Bit_score: 399
  • Evalue 1.50e-108
  • rbh
Putative site-specific recombinase {ECO:0000313|EMBL:GAD51130.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 210.0
  • Bit_score: 399
  • Evalue 2.10e-108
putative integrase similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 210.0
  • Bit_score: 389
  • Evalue 7.50e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGGACATTCAGACCTTGATCCTGCTGTTCACGAGCGGCGCCCTTGGAACTCAGGACAAAATGTAGGGCCCAAACGCCCGCTTAAGCCAAGAGACATTTGGGCCATTCGCTTTTATCTCGACGAACATAGGCGCCTGCGTGACCGAGCGTTGTTCGATCTGGCAATCGACAGCAAATTGCGTGGCTGTGATCTCGTAAAGATCAGGATTGGCGACATCGTAAGCGGCGGCCATATTCGCAACCGCGCGACGGTCATCCAACAGAAGACCGGTCGACCGGTTCAATTTGAGATCATGACCGAGGCACGAAGGACGTTGGAAGCCTGGCTGCAGCGCCGTGGCGGGACAATTCTCGATTTCGTCTTCCCAAGTCGGGTCGACTACATGGGACATCTCAGCACTCGGCAATATGCGCGCCTAGTGGATGAATGGGTCACAACTATCGGCCTCGACTGCCGTGAGTATGGCACGCATTCGATGCGGCGAACAAAGGCATCACTCATCTACAAGGCGACTGGCAACCTGCGAGCTGTGCAGATCTTGCTTGGCCACACCAACATCGAAAACACGGTCAGATATCTAGGTGTAGACGTAGACGATGCGCTCACTTTGTCCGAGCGGACAGACATTTGA
PROTEIN sequence
Length: 211
MGHSDLDPAVHERRPWNSGQNVGPKRPLKPRDIWAIRFYLDEHRRLRDRALFDLAIDSKLRGCDLVKIRIGDIVSGGHIRNRATVIQQKTGRPVQFEIMTEARRTLEAWLQRRGGTILDFVFPSRVDYMGHLSTRQYARLVDEWVTTIGLDCREYGTHSMRRTKASLIYKATGNLRAVQILLGHTNIENTVRYLGVDVDDALTLSERTDI*