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scnpilot_p_inoc_scaffold_1897

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1897_1
unknown

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(547..978)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=Q1N8D3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT07256.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
BadM/Rrf2 family transcriptional regulator
scnpilot_p_inoc_scaffold_1897_3
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1071..1508
DNA (438bp) protein (146aa)
SEC-independent protein translocase protein TatC n=2 Tax=Sphingomonadaceae RepID=Q1N8D2_9SPHN
SEC-independent protein translocase protein TatC {ECO:0000313|EMBL:EAT07257.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
preprotein translocase subunit TatC
scnpilot_p_inoc_scaffold_1897_4
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1525..2211
DNA (687bp) protein (229aa)
Alternative oxidase n=2 Tax=Sphingomonadaceae RepID=Q1N8D1_9SPHN rbh
Alternative oxidase 1 {ECO:0000313|EMBL:EQB12493.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lacto
alternative oxidase
scnpilot_p_inoc_scaffold_1897_5
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..3630
DNA (1212bp) protein (404aa)
Flavohemoprotein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8C9_9SPHN rbh
Flavohemoprotein {ECO:0000313|EMBL:EAT07260.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (stra
nitric oxide dioxygenase
scnpilot_p_inoc_scaffold_1897_6
unknown

Not on your lists

comp(3993..4124)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4300..5979)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000305C36B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP74764.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_p_inoc_scaffold_1897_8
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..6949)
DNA (687bp) protein (229aa)
Phytanoyl-CoA dioxygenase (PhyH) n=1 Tax=Novosphingobium sp. AP12 RepID=J2GE29_9SPHN rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:AJR25233.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp
hypothetical protein
scnpilot_p_inoc_scaffold_1897_9
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7102..7734
DNA (633bp) protein (211aa)
Putative site-specific recombinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ93_9SPHN rbh
Putative site-specific recombinase {ECO:0000313|EMBL:GAD51130.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
putative integrase
scnpilot_p_inoc_scaffold_1897_10
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7927..9156)
DNA (1230bp) protein (410aa)
UPI0003D036FC related cluster n=1 Tax=unknown RepID=UPI0003D036FC rbh
Chromate transporter {ECO:0000313|EMBL:KEO86034.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp
chromate transporter
scnpilot_p_inoc_scaffold_1897_11
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9520..9987
DNA (468bp) protein (156aa)
Putative Rrf2 family DNA binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH44_9SPHN
Putative Rrf2 family DNA binding protein {ECO:0000313|EMBL:GAD47340.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
BadM/Rrf2 family transcriptional regulator
scnpilot_p_inoc_scaffold_1897_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9970..10674)
DNA (705bp) protein (235aa)
glutamine amidotransferase (EC:6.3.5.2)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXV8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47343.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_1897_13
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..11597)
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
cysteine synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B56079
cysK; cysteine synthase
scnpilot_p_inoc_scaffold_1897_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11594..12235)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y337_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47341.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1897_15
unknown

Not on your lists

comp(12359..12607)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_16
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13102..13347)
DNA (246bp) protein (82aa)
Putative transcriptional regulator n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AQC9_PSERE
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAN47958.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
scnpilot_p_inoc_scaffold_1897_17
unknown

Not on your lists

13424..13756
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_18
Providencia rettgeri, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13819..14361
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Providencia rettgeri Dmel1 RepID=K8WNE9_PRORE
Uncharacterized protein {ECO:0000313|EMBL:EKT58982.1}; TaxID=1141663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia r
hypothetical protein
scnpilot_p_inoc_scaffold_1897_19
unknown

Not on your lists

14361..15200
DNA (840bp) protein (280aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_20
unknown

Not on your lists

comp(15197..15532)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1897_21
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15529..16110)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZN6_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG50220.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
scnpilot_p_inoc_scaffold_1897_22
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16114..16479)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTR3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:BAR57691.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
hypothetical protein
scnpilot_p_inoc_scaffold_1897_23
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16517..17098)
DNA (582bp) protein (194aa)
Integrase family protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZN8_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KFL46742.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
integrase family protein
scnpilot_p_inoc_scaffold_1897_24
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17507..18073)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIG2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47867.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1897_25
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18081..19412)
DNA (1332bp) protein (444aa)
Putative ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4A2_9SPHN rbh
Putative ATPase {ECO:0000313|EMBL:GAD47866.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tar
recombination factor protein RarA rbh
scnpilot_p_inoc_scaffold_1897_26
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19506..20183
DNA (678bp) protein (226aa)
PadR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB29_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO93476.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_1897_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20246..20581
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8R1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB53279.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
scnpilot_p_inoc_scaffold_1897_28
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20687..21844)
DNA (1158bp) protein (386aa)
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB28_9SPHN
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EGD58105.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_1897_29
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21966..23795)
DNA (1830bp) protein (610aa)
GTP-binding protein TypA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE06_9SPHN rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EHJ60447.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
GTP-binding protein TypA rbh
scnpilot_p_inoc_scaffold_1897_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24161..26512
DNA (2352bp) protein (784aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSS0_9SPHN
Pesticin receptor {ECO:0000313|EMBL:AKH42353.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrob
TonB-dependent receptor
Displaying 30 items

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