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scnpilot_p_inoc_scaffold_1897_11

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 9520..9987

Top 3 Functional Annotations

Value Algorithm Source
Putative Rrf2 family DNA binding protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH44_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 145.0
  • Bit_score: 223
  • Evalue 1.40e-55
Putative Rrf2 family DNA binding protein {ECO:0000313|EMBL:GAD47340.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 145.0
  • Bit_score: 223
  • Evalue 2.00e-55
BadM/Rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 147.0
  • Bit_score: 214
  • Evalue 2.50e-53

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGCTGTCACAAAAAACCCGGTACACCATTCGTGCCCTGCAGCACCTTGCAGACCTTTATCCCGACGGCCGCGCGCAAATGGGCGAAATTGCCAAGGCACAGAACATACCGGCGAAATTCCTTACGATCATTCTGTCTGAAATGGCCCGGGTGGGTATCGTACATTCACAACGCGGTCGTGATGGCGGCTATCAATTGGCGCTTCACCCGGTCGACATACGTTACGGCGATATCGTGCGCCTGACTCGCGGCTCGCTGGCGCTCGTTCCATGCGCCAGCCGCTTCGCGCACGAAACCTGCTCCCATTGCCTGCCGGAAAAAGACTGCCGTTTGCGGGCCCTCATGCTCAAGGTGAGGGACGAGACGGCCGCTATTCTGGATTCCATCACCCTGGCGCACGAGATTGAAACCGTTCCTGAGTTCACTGACGACGCTGCGTCGGAACCAGCTTCAACGCAGGGTTTCTAA
PROTEIN sequence
Length: 156
MLSQKTRYTIRALQHLADLYPDGRAQMGEIAKAQNIPAKFLTIILSEMARVGIVHSQRGRDGGYQLALHPVDIRYGDIVRLTRGSLALVPCASRFAHETCSHCLPEKDCRLRALMLKVRDETAAILDSITLAHEIETVPEFTDDAASEPASTQGF*