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scnpilot_p_inoc_scaffold_2287_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..1317)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD06FE similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 443.0
  • Bit_score: 602
  • Evalue 2.50e-169
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 448.0
  • Bit_score: 612
  • Evalue 5.70e-172
preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 448.0
  • Bit_score: 597
  • Evalue 2.20e-168

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGCTCGATTTTCCCACCTGGAAAAGGGCCTGGCTCTGGTTCCTGACCCTCGCGGCGGTTGCCGCGGCGCTCCCGACGCTTGGTTCGCTTGGCGGTGTTAGTATTCCCGGGCCGCAGGTCAATCTGGGGTTGGACCTTGCTGGCGGCAGCCAGATTCTGCTTGAAGCCAATACCAAGCAGGTAGCCCGCCAGCGACTGGAGAGCATGGAAGAAGATGTTCGCCGCGTGTTGCGCCAGGCATCGCCTGCTATCCGCATTGGCGATCTGTCGACCAGCAATGGCCGCATCAGCTTCCTGCTGGACAATCCCTCCCAGGTCGATCGAGCACGCGAGGAACTCCTGCCGCTGGTCAATGGCAGCGGCCCTGTGCGTGAATGGAATCTCGAAGTGGTTGATGGCAGCCGTTTTGTGCTGACGCCCACCAAGAATGGCCTCGATCAGGCTATCACCAATGCGATGGATACGGCGACCGAAGTGGTTCGCAAGCGTATCGACGCTCTGGGTACGCGTGAACCGACCATCATTCGCGAAGGCGATACTCGCATTTCTGTGCAGGTTCCCGGTCTTAGCGATCCCGAGGCGCTGAAATCGCTGCTGGGCCAGACGGCAAAGCTCGAATTCAAGCTGGTTGATACTACCGCACTGCAATCCGACGTGGCGCAGGGCATTGCCCCTCCGGGTAGCGAGATCGTGCCTTATGCTCCCGGCACACCGCTTGCAGGCACCTCGATTGCGGTGAAGCGTCTGGGCGGCATTCGCGGCGATTCGCTGACCAATGCGCAGCAGAGCTTCGACCAGCGCAACAACCAGGCCGTGGTGGACATCACCTTCGACCAGGCCGGTGGCAAGAAATTCGCCGACCTCACTGCGCAGAACACCGGTAAGCCCTTCGCCATCATCCTCGATGGCCAGGTGCTTTCGGCCCCCAATATCAATGAGCCGATTCTGGGCGGCAAGGCCCAGATTTCCGGCAGCTTCACCACCGAATCCGCGAACCAGCTGGCGATCTCGCTACGCTCGGGCGCGCTTCCGGTGGATCTCACGGTGGTTCAGCAAGGCACTGTGGGCCCCGAACTCGGCGCGGATTCGATCCGCAAGGGCCTGCTCGCCATGGCGGTAGGTTCGGGCCTTGTGCTCCTGTTGATCGGCTTCACTTATGGCCGCCTGGGCGTTTATGCCAATATCGCGCTGGTGCTGAACGTGCTCATGCTGCTGGGTGTGATGGCGGTGTTCAAAACCACGCTGACTCTTCCCGGCATCGCGGGTTTCGTGCTGACCATCGGTGCGGCGGTGGACGCCAACGTGCTGATCAACGAG
PROTEIN sequence
Length: 439
MLDFPTWKRAWLWFLTLAAVAAALPTLGSLGGVSIPGPQVNLGLDLAGGSQILLEANTKQVARQRLESMEEDVRRVLRQASPAIRIGDLSTSNGRISFLLDNPSQVDRAREELLPLVNGSGPVREWNLEVVDGSRFVLTPTKNGLDQAITNAMDTATEVVRKRIDALGTREPTIIREGDTRISVQVPGLSDPEALKSLLGQTAKLEFKLVDTTALQSDVAQGIAPPGSEIVPYAPGTPLAGTSIAVKRLGGIRGDSLTNAQQSFDQRNNQAVVDITFDQAGGKKFADLTAQNTGKPFAIILDGQVLSAPNINEPILGGKAQISGSFTTESANQLAISLRSGALPVDLTVVQQGTVGPELGADSIRKGLLAMAVGSGLVLLLIGFTYGRLGVYANIALVLNVLMLLGVMAVFKTTLTLPGIAGFVLTIGAAVDANVLINE