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scnpilot_p_inoc_scaffold_2287_3

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(2024..2875)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 283.0
  • Bit_score: 356
  • Evalue 9.50e-96
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F2 similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 282.0
  • Bit_score: 372
  • Evalue 4.60e-100
  • rbh
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KKC26726.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 284.0
  • Bit_score: 362
  • Evalue 5.10e-97

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Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGCGGCTGGCGCGGTTCGAGATCGATGGGCAGATCGACATTGGCGTGGTGGAGGATGAGGGAATCATCAGCCTCGGGGCGGCCGGATGCCTGTTTCCCGATATGCTCTCGATCATAGCGGCGGGCGATGCCGCGCTCGATCAGATACGGGAGATGACCGATGCCATCGCCCCGCATCACCGGCTGCAGGATGTCCGATTCCTCGCGCCTTTACGGCCCGGAAAATATCTCGCCATCGGCATGAATTACGCGAAGCATATCGCCGAAATGGGGCGCGATTCTGCGCCGCCCCATCAATATTGGTTCAACAAGCAGACCACCTGCATTTCCGATCCCTTCGACCCCATCGATCCCGGTGTTTCCACCATGGTCGATTACGAAGTGGAACTGGGCGTAGTGATCGGCGCGAAGGCCAAGGGAGTGCGCGCGGATGAGGCTTTGTCCCACGTCTTCGGCTATGTCGTGGCCAATGATGTTTCCGCCCGAGACTGGCAGAAACACACGCCCACTTTCACCATGGGCAAGAGCTTCGATACGCACGGCCCCATCGGCCCCTGGATCGTGACGGCCGACGAGATTCCCGACCCTCAGACACTGGCGCTGCGCTGCTATGTGAATGGCGAGAAACGGCAGGAAAGCACCACTGCCAACATGATTCATTCCATCGCCAGCCAGATCGAATATCTCTCCACCGCCTTCACGCTGGAGCCGGGCGACCTGATCGCCACCGGCACGCCGGAAGGGGTGGGCATGGGGATGAATCCCCCGCAATTCCTGAAGGAAGGCGATGTCGTGCGCTGCGAGATCGACGGTATCGGCGCGATCGAAAACCGCGTGACAAAAGCGGGCTGA
PROTEIN sequence
Length: 284
MRLARFEIDGQIDIGVVEDEGIISLGAAGCLFPDMLSIIAAGDAALDQIREMTDAIAPHHRLQDVRFLAPLRPGKYLAIGMNYAKHIAEMGRDSAPPHQYWFNKQTTCISDPFDPIDPGVSTMVDYEVELGVVIGAKAKGVRADEALSHVFGYVVANDVSARDWQKHTPTFTMGKSFDTHGPIGPWIVTADEIPDPQTLALRCYVNGEKRQESTTANMIHSIASQIEYLSTAFTLEPGDLIATGTPEGVGMGMNPPQFLKEGDVVRCEIDGIGAIENRVTKAG*