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scnpilot_p_inoc_scaffold_2287_9

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6788..9082

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D4E7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 756.0
  • Bit_score: 880
  • Evalue 1.40e-252
  • rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK84544.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 756.0
  • Bit_score: 880
  • Evalue 1.90e-252
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 573.0
  • Bit_score: 418
  • Evalue 5.50e-114

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGAGTATGCGGGGGAAACCATTTGAGGGCGTCGCAGCTTGGCTGCTGGGCGCCCGGACACCGGTACCCCCGGCAATCTATGCCGAACTGACCAAAGGACTGTTCGCCTCGCTTCCGATTTTCCTCGGCGGCGTCATCAACACCACCGCAGTGGCGGGTGTGGCGGCATGGCGCCAGCCCTACCCTCCCTTCCTCGTATGGTTCCTGTTCGAGATCGCCCTGGGCCTCGTCAGGATCGGCGTATTGACCCGTGGCCGCGCGGTCCTGCGCTCCGGGGGCGAACCGCCGCGTTTCCTTGCTGCGTTACTATCCTGTTGCTGGGCCGCTTCGGTTGGCATGGGCACCGCCCTATGTCTCGATAGCGGGGACTGGCTGCTTGCCTGCATTGCCGGCATTTCGGCCGCCGGCATGGTGTGCGGCGTATGCCTGCGCAATTTCGGCACGCCGCGCCTTTCGGCCATAATGTGCTTCCTGATCCTGGCCCCCTGCGGGATTGTGAGCGTGTTTGCGGACGAAAGCCTGTTGACGATCATCGCCCTGCAACTGCCAGCTTACATGTTCACGATCTTCGCTGCGGGATTCTCGCTTCAGGAAATGCTGGTGTCGCGCATGACAGTGCTCAGCGATCTTCAGCGTAGCGAAACGCTCAACCAGACGATCCTCAAATCCAGCCCTGACCGTACCCTGATCCTGGACAGTTCCTATCGCATCCTGTTCACTAACATCCCCAATGGCATGACACAGCCGGAAGAGCTTGTCGGCCTCTCCTGGCCTTCGCTGATTCCGCCTGAGGAACGCGAGCATGCCATCGCGGCGCTGCGCATGGCGGAATCCGGCCTGCCCGGAAATGTCCTTACCCATCAGATGGATCGCAACGGGCAATGCCAGTGGTTCGATGTTATCGCCAACCGCATCAGCGACGATTCAGGCCGCATTATCGTGGTGGCGCGGGACATAACTCACCAGAAGAAGTCCGAGGAACATGCCCTGTGGATGGCACATCACGATGCCCTGACCGGCCTGCCCAATCGCGCCTTGCTGCAGGGCCGACTGGAAGATGTGCTGACCGATTTCGGCGCCAGCCAACAAACTGCGCTGCTCATCCTCGATGTCGACAATTTCAAGACGATCAACGATGCGCTGGGCCACGATGCGGGGGACATATTGCTATGCACCTTCGCCAATCGCCTGCGCGCCGCGGTTAATGAAGGCGATCTGGTGGCTCGCACCGGGGGCGATGAATTCGCCGTGATCGTTTCAGCCACGACAGAAGACGATGTGGTCGCTGCGGCCGACCGGATTTTCGACCTGTTGCGCGAACCCTTCTATCATGAAGGCCGCCTGCTGGAATGCCGGGCCAGCATCGGCGCCAGCATGATCCCGCGCGACGGGATAAGCCGCTCCGAAATCATGAAGGCCGCGGACATCGCGCTTTATGCCGCCAAGGCCGGCGGCAGGGCGCGGCTCAAGCTGTTCGAACCGGCGATGATGGTAGAGGTCGAACGCCATCAAAGCATGATTGCCTCCGCCCGCCGCGCCCTGCAGGCCAATTCGATCATCCCGCATTACCAGCCCAAGGTTTCGCTCAGCAATTCGCGGATTGTCGGTTTCGAGGCGCTGCTGCGCTGGCGCGACCCCTATGGGCGACTACAGGGCCCGGACGTGCTCAAAGCAGCCTTCGAGGACCCGGCTTTGAGTGGCCCGCTAAGCGACCGCATGCTTGATGGCGTGCTCCATGACATGCGGGACTGGCTCGGCCAGGGCCTGGATTTCGGGCATGTCGCGATCAATGTCACGGCGGCGGATTTCAGGCGCGGTTCCTTTGCGGAACGCCTGCTGGAGCGGCTGGACGATCACGGCGTGCCGCCTTCCTGCATCCAGATTGAAGTGACCGAAACCGTCTTTCTGGGGCGCGGGGCAAGCTATGTGGAAGATGCGCTCAAGCACCTCAATGCGCATGGTATCCTCATCGCGCTGGACGATTTCGGCACTGGCTATGCCTCACTATCCCACCTCAACCAGTTCCCGGTGGACCTGCTGAAGATCGACCGCTCCTTCGTCGGCGAGATCGGCTGCAACCCGGATGCGGAAGCCATTTCCACCACCGTGATCAATCTCGGCCACTGCCTGGGGCTGGAAGTGATCGCGGAAGGCGTGGAAACCCGCGCGCAGGAAGCCTATCTGGCGACAGTGGGCTGCGATACCGGCCAGGGCTATCTCTATTCGGAGGCGCGGCCAGCCCATGCCATCCCGAACATGCTGCGCGAACAACCGATCCCGGCTCTCAGGGCCTGA
PROTEIN sequence
Length: 765
MSMRGKPFEGVAAWLLGARTPVPPAIYAELTKGLFASLPIFLGGVINTTAVAGVAAWRQPYPPFLVWFLFEIALGLVRIGVLTRGRAVLRSGGEPPRFLAALLSCCWAASVGMGTALCLDSGDWLLACIAGISAAGMVCGVCLRNFGTPRLSAIMCFLILAPCGIVSVFADESLLTIIALQLPAYMFTIFAAGFSLQEMLVSRMTVLSDLQRSETLNQTILKSSPDRTLILDSSYRILFTNIPNGMTQPEELVGLSWPSLIPPEEREHAIAALRMAESGLPGNVLTHQMDRNGQCQWFDVIANRISDDSGRIIVVARDITHQKKSEEHALWMAHHDALTGLPNRALLQGRLEDVLTDFGASQQTALLILDVDNFKTINDALGHDAGDILLCTFANRLRAAVNEGDLVARTGGDEFAVIVSATTEDDVVAAADRIFDLLREPFYHEGRLLECRASIGASMIPRDGISRSEIMKAADIALYAAKAGGRARLKLFEPAMMVEVERHQSMIASARRALQANSIIPHYQPKVSLSNSRIVGFEALLRWRDPYGRLQGPDVLKAAFEDPALSGPLSDRMLDGVLHDMRDWLGQGLDFGHVAINVTAADFRRGSFAERLLERLDDHGVPPSCIQIEVTETVFLGRGASYVEDALKHLNAHGILIALDDFGTGYASLSHLNQFPVDLLKIDRSFVGEIGCNPDAEAISTTVINLGHCLGLEVIAEGVETRAQEAYLATVGCDTGQGYLYSEARPAHAIPNMLREQPIPALRA*