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scnpilot_p_inoc_scaffold_2890_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4240..4935)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GTE5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 231.0
  • Bit_score: 392
  • Evalue 3.50e-106
  • rbh
Membrane protein {ECO:0000313|EMBL:KER37648.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowens similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 231.0
  • Bit_score: 392
  • Evalue 4.90e-106
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 231.0
  • Bit_score: 391
  • Evalue 1.70e-106
  • rbh

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Taxonomy

Sphingobium lucknowense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGACGACCGAAAAGCCCGCCGCTTCCCCGCTCCCCTTGCTCCTGCTGCTGCTCTCCGTGACGACAGGCCTTGTCGACGCCATTTCGGTCCTGGGCCTTGGAAAAGTGTTCACCGCGAACATGACCGGCAATGTGGTGTTCCTCGGCTTTGCAGCCAGCGGCGCACCGGGATTCAAATTCACGCCTTATGTCGTCGCCATCGCTTCGTTCATGGTCGGCGCGCTGGTCGGCGGACATACGGCCAAGCGTCACGCGGGGTCACCGCTTCGTCGCTGGCTGATCGTCGCTGCTTCGGTCGAGGCTATCCTCCTCTGGCTCGCGGCGGCTGTGGCGGTGGGCTTCGACGTGGCGACCCAGACGCCCAGCGCCAGCGTCTACGTCATCATCGCGTTGACCGGCCTGGCTATGGGCTTTCGCAATGCGACCATCCGCCAACTGAAGGTGCCGGACCTCACCACGACCGTCCTCACATTGACGATCACCGGGCTCGCCGCCGACTCCGGCTTTGCCGGCGGCAGCAACCCCAACTGGGCGCGACGCATCGGCAGCGTTGCCGCCATCTTTCTTGGAGCGGCCATTGGTGCCTATCTCGTCACCCATGGCGGGCTGGTCCCCCCCCTCCTCCTGGCCGGCGGATTGATTTTTGCGGGCACATTAGTCTGCGCCCTGCACCCCGCCGCAGCGCGACCGCTCTAA
PROTEIN sequence
Length: 232
MTTEKPAASPLPLLLLLLSVTTGLVDAISVLGLGKVFTANMTGNVVFLGFAASGAPGFKFTPYVVAIASFMVGALVGGHTAKRHAGSPLRRWLIVAASVEAILLWLAAAVAVGFDVATQTPSASVYVIIALTGLAMGFRNATIRQLKVPDLTTTVLTLTITGLAADSGFAGGSNPNWARRIGSVAAIFLGAAIGAYLVTHGGLVPPLLLAGGLIFAGTLVCALHPAAARPL*