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scnpilot_p_inoc_scaffold_2890

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2890_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..920)
DNA (918bp) protein (306aa)
Cystathionine beta-lyase MetC {ECO:0000313|EMBL:AKH42364.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AKH42364.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrob
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IK86_9SPHN
scnpilot_p_inoc_scaffold_2890_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(913..1770)
DNA (858bp) protein (286aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
UPI0003D026F6 related cluster n=1 Tax=unknown RepID=UPI0003D026F6 rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
scnpilot_p_inoc_scaffold_2890_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1839..2576)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVV2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD49504.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_2890_4
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

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2593..3129
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EQA5_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:KJB49786.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
scnpilot_p_inoc_scaffold_2890_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3135..3656
DNA (522bp) protein (174aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I5T3_9SPHN
7-cyano-7-deazaguanine reductase
scnpilot_p_inoc_scaffold_2890_6
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3663..4106)
DNA (444bp) protein (148aa)
Thioredoxin n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZPI1_9SPHN
ScaffoldA10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29800.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
thioredoxin
scnpilot_p_inoc_scaffold_2890_7
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4240..4935)
DNA (696bp) protein (232aa)
Membrane protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GTE5_9SPHN rbh
Membrane protein {ECO:0000313|EMBL:KER37648.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowens
hypothetical protein rbh
scnpilot_p_inoc_scaffold_2890_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5042..6403)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z436_SPHJU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAI97368.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
scnpilot_p_inoc_scaffold_2890_9
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6396..6824)
DNA (429bp) protein (143aa)
Membrane protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HX94_9SPHN
Membrane protein {ECO:0000313|EMBL:EQB03945.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.
hypothetical protein
scnpilot_p_inoc_scaffold_2890_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6821..7720)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WCI0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK80340.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
hypothetical protein
scnpilot_p_inoc_scaffold_2890_11
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7901..9826)
DNA (1926bp) protein (642aa)
Amidohydrolase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GVI5_9SPHN rbh
putative hydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:KER37644.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense
scnpilot_p_inoc_scaffold_2890_12
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..10071)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z432_SPHJU
hypothetical protein
XapX domain-containing protein {ECO:0000313|EMBL:EPR17561.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
scnpilot_p_inoc_scaffold_2890_13
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10217..10873)
DNA (657bp) protein (219aa)
Putative alpha/beta hydrolase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z430_SPHJU rbh
putative alpha/beta hydrolase rbh
Putative alpha/beta hydrolase {ECO:0000313|EMBL:BAI97362.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
scnpilot_p_inoc_scaffold_2890_14
unknown

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comp(10942..11085)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 14 items

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