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scnpilot_p_inoc_scaffold_3200_11

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(10025..10297)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G596_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 90.0
  • Bit_score: 111
  • Evalue 3.60e-22
TonB-dependent receptor {ECO:0000313|EMBL:GAO54816.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 90.0
  • Bit_score: 131
  • Evalue 6.00e-28
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 90.0
  • Bit_score: 113
  • Evalue 4.50e-23

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGCAGATCGTGGAAGGCCTGCCGGGCTATCTATCGGGCGGTCAGGCCGCCGCGATTGCCGCCGCCGCGCCTTACACGCGCACGGTGGACGATCTTTCGGCCTCGGTCACTTATGCGATGGATTCCGGGCTGGAGTTCTCGCTGTGGGGCCGCAACCTGCTCGACGATCGCTATATCCTGTCGATCTTCGATTCAGTGGCGCAGCCGCTCTCGATTTCCGGCTATCCCAACCAGCCGCTCACCTGGGGTGGAACGGTGCGCTTCAAGTGGTAA
PROTEIN sequence
Length: 91
VQIVEGLPGYLSGGQAAAIAAAAPYTRTVDDLSASVTYAMDSGLEFSLWGRNLLDDRYILSIFDSVAQPLSISGYPNQPLTWGGTVRFKW*