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scnpilot_p_inoc_scaffold_3200

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3200_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..585
DNA (585bp) protein (195aa)
DNA replication and repair protein RecF n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I283_9SPHN
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
recombinase RecF
scnpilot_p_inoc_scaffold_3200_2
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(616..1341)
DNA (726bp) protein (242aa)
Alpha/beta hydrolase fold n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A049_DESOH
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KCZ92464.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomona
alpha/beta hydrolase fold protein
scnpilot_p_inoc_scaffold_3200_3
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1505..3367
DNA (1863bp) protein (621aa)
glycosyl transferase family 1 n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002D70CF4 rbh
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_3200_4
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3465..4265)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUQ2_PSEUU
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3200_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4396..5106)
DNA (711bp) protein (237aa)
Arylesterase {ECO:0000313|EMBL:AKH42350.1}; EC=3.1.1.2 {ECO:0000313|EMBL:AKH42350.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alter
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F05866
acyl-CoA thioesterase i protein
scnpilot_p_inoc_scaffold_3200_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5165..5866
DNA (702bp) protein (234aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:AKH42351.1}; EC=3.6.3.- {ECO:0000313|EMBL:AKH42351.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
Probable ABC transporter ATP-binding protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PC39_9SPHN rbh
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_3200_7
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5863..8397
DNA (2535bp) protein (845aa)
ABC transporter permease n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IIE5_9SPHN rbh
FtsX-like permease family protein {ECO:0000313|EMBL:AKH42352.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc
ABC transporter permease rbh
scnpilot_p_inoc_scaffold_3200_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8394..8813)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G980_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25593.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_3200_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8984..9400)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G979_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25594.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_3200_10
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9510..9917)
DNA (408bp) protein (136aa)
Inner membrane protein YhaI n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GNU0_XANCT
Inner membrane protein YhaI {ECO:0000313|EMBL:ELQ07406.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas t
hypothetical protein
scnpilot_p_inoc_scaffold_3200_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10025..10297)
DNA (273bp) protein (91aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G596_NOVAD
TonB-dependent receptor {ECO:0000313|EMBL:GAO54816.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
Displaying 11 items

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