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scnpilot_p_inoc_scaffold_2453_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3554..4360)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein VirJ n=1 Tax=Sphingomonas wittichii RepID=UPI0002DA4D17 similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 234.0
  • Bit_score: 260
  • Evalue 1.40e-66
Type IV secretory pathway VirJ component-like protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 239.0
  • Bit_score: 258
  • Evalue 2.00e-66
Type IV secretory pathway VirJ component-like protein {ECO:0000313|EMBL:ABQ71138.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 234.0
  • Bit_score: 258
  • Evalue 9.70e-66

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
TTGAGGAAAACCCGCGCGTTCCTGCTCTCGTTGGCGGCCATCGCGGCGGGGCTTGGCGGTTTTGCGGCCTATGTCGGTTATTTCGGCGGGCAATTGTTCTTCCCGATAGAGGCACGAGCGGACATCCGGCCGCTCCAGCGCGATATCGCGGCAGTGGTCCTGTCAGGCGACATGGGCTTTCACATGGGCATGAGCCCTGAAGTAGCCGAGCGGCTGGCGGCGGACGGGATACCCGTCATCGGTGTCAGTTCCCTCGTCTATTTCCGCCACCGCCGCAGCCCCGATGAAGCCGCCGACCTGCTGCGCGAGGCCATCGCCAAGGCGACCCGGTTCGGCCATGCGCGCAAGGTGCTGCTGATCGGCCAGTCCTATGGCGCGGATATGGTCAATGTCGGCCTTTCCCGCATGAGTGCGGCAGAGCGCGAGCGGATCGCGATGGTGGGGCTGATCGTGCCGACCGACAATATCATCATGCGCGCATCGCCTGCCGAATTGTTCGAACTGGTGGAGCCCGATGCGCAGGCCATCGCCACTGCGCGGGGCCTCACCTGGGCGCCGGTCCTGTGCCTTTATGGCCGGGAAGAAACGAACAGCCTGTGCCCCCAGCTCAAGGCGCCCAATGTGCAAGTGGCCGGTTTGCCGGGGGGCCATGCGCTGAACCACGATCCCGATACGCTCTACGCCCATCTGCGCCGCGCCATCGCCGCCCTGCCTGCTCCTGCGGCAGGCGATGCCCGCGCAACACCCGCCAACATGACCAATCCTTCATCTGGCGGAAAAGGCCCCTTCATTCGGCAGGCTCCATAA
PROTEIN sequence
Length: 269
LRKTRAFLLSLAAIAAGLGGFAAYVGYFGGQLFFPIEARADIRPLQRDIAAVVLSGDMGFHMGMSPEVAERLAADGIPVIGVSSLVYFRHRRSPDEAADLLREAIAKATRFGHARKVLLIGQSYGADMVNVGLSRMSAAERERIAMVGLIVPTDNIIMRASPAELFELVEPDAQAIATARGLTWAPVLCLYGREETNSLCPQLKAPNVQVAGLPGGHALNHDPDTLYAHLRRAIAALPAPAAGDARATPANMTNPSSGGKGPFIRQAP*