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scnpilot_p_inoc_scaffold_2453

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2453_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(319..1155)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036EB358
TonB-like protein {ECO:0000313|EMBL:EGD60677.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni
hypothetical protein
scnpilot_p_inoc_scaffold_2453_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1374..2666
DNA (1293bp) protein (431aa)
Monooxygenase, FAD-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G648_NOVAD rbh
hypothetical protein
Monooxygenase, FAD-binding protein {ECO:0000313|EMBL:ABD26675.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
scnpilot_p_inoc_scaffold_2453_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2663..3118
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G649_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49118.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_2453_4
unknown

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comp(3298..3507)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2453_5
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3554..4360)
DNA (807bp) protein (269aa)
type IV secretion protein VirJ n=1 Tax=Sphingomonas wittichii RepID=UPI0002DA4D17
Type IV secretory pathway VirJ component-like protein
Type IV secretory pathway VirJ component-like protein {ECO:0000313|EMBL:ABQ71138.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
scnpilot_p_inoc_scaffold_2453_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4357..5859)
DNA (1503bp) protein (501aa)
Virulence factor family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFS1_SPHWW rbh
virulence factor family protein rbh
Virulence factor family protein {ECO:0000313|EMBL:ABQ71137.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas
scnpilot_p_inoc_scaffold_2453_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5960..7330)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFS0_SPHWW rbh
integral membrane sensor signal transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_2453_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7333..8022)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFR9_SPHWW rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ71135.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
scnpilot_p_inoc_scaffold_2453_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8019..8435)
DNA (417bp) protein (139aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFR8_SPHWW
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ABQ71134.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
scnpilot_p_inoc_scaffold_2453_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8852..9328
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFR5_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ71131.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
scnpilot_p_inoc_scaffold_2453_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9353..12004
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFR4_SPHWW rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ71130.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
hypothetical protein rbh
scnpilot_p_inoc_scaffold_2453_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12011..12703)
DNA (693bp) protein (231aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:BAK67551.1}; EC=1.14.11.- {ECO:0000313|EMBL:BAK67551.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphapr
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKZ9_9SPHN rbh
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
Displaying 12 items

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