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scnpilot_p_inoc_scaffold_2517_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(492..1907)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C8E similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 468.0
  • Bit_score: 424
  • Evalue 1.30e-115
  • rbh
Outer membrane protein OprM {ECO:0000313|EMBL:AKH44193.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alt similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 467.0
  • Bit_score: 539
  • Evalue 5.00e-150
RND transporter similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 466.0
  • Bit_score: 464
  • Evalue 4.10e-128

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGCGTTTCCGCCTTCTTTTATCGCTTCCACTCCTCGCTCTGGCGGCCTGCAAGGTGGGCCCGGATTATCAGCGCCCGCACAGCGCCATGGCGGATGACTGGCTGGAGCCTGCCTCCACCGCGCCGGTCAGTGCCGATTGGTGGCGGCAGTTCGGCGATCCGCAGCTGACCGCCCTGGTGGAGCGCGCGCTCGCCTCCAGCCCGGACATCCGCCAGGCCAAGGCCCGCATTGCCGAGGCGCGCGCCATGCGCGAAGCCGCGCAGGGCGGGCAGATGCCGCTGGTCACCATGACGCGCGACACATCGTTCAACCGCATCAGCGAGAACGGGCAGTTCCCGGTGAGCAAGATCCCCGGCTTCGATCCGGAATTCCCGCTGATCGACAGCGGTTTCGATGCCAGCTGGGAAGTGGATACATGGGGCCGCGCCAGCCGCGAGGTGGAGCGGGCGCGCGCCATGGAACAGGTGGCCGAATGGGCCCGGCGCGATGCCGTGGTGTCGCTGACGGCGGAAGTGGCGCGCACCTATGTCGATTTCCGCCTCGCTCAGGAACAGCTCGCCACCGCGCGGACCGAACAGGATGCCGCCGCGAAACTGGCGGAGCTGGCCGATATGCGCGCCCGCGCGGGCGAGGGATCGCGGCTGGAGGCGGAACAGGCCACAGCCCAGCGAGAAGCATCCTCGGCGGCACTGGCTCAGGCGGAGGCCGATGTCGCCGCGGCGGCCTATCGCCTCGCGGCTCTGGTGGGCACGCCGCCCGAACAGCTGGTTCCCGATCTGCTGGCGAGCAGCGGCCCGGTTCCCACCGCGCCTGACAGCATTGCCAGCGGCATCCGCTCCGACCTGCTGGAGCGCAGGCCCGATATTCGCCGCGCCGAAATGGAACTGGCCGCCGCCACTGCCGGTATCGGAGTGGCCAAGGCCGATCTCTATCCGCGCTTCACCCTGCAGGGCAGCATCGGGCTACAGGCGCAATCGCTGGACGATCTGGTGACAGGGGAGAGCCTGCGTTATCTGGCGGGCGGCTTCTTCCGCTGGCCCCTGTTCAATTTTGGCCGCGTGCGCGCGCAAATCCGCGCGGCGGATGCCAAGGCGGATGGCGCGGCGGCATCCTACGAGGCGGCCATCGTAAAGGCCCTGTCGGAAAGCGAAGGCGCCGCCAACCGCTTCGCCGCCTCCGCCCGGTCCGGCACCAATGCGGCCAGTTCTCTGGAACGGGAGGACCGGGCCTTCACCCTTGCCCGCCTGCTGTTCGACAAGGGGGAAACGAACCGCCTGCAATTGGAACAGGCCCGCCTGCGCCTCGCCCAGTCCCAACGCCAGGACGCCCAGGCCCGCGCGGGCAAGGCAGGCGCGGCGATTGCGCTCTACAAGGCGCTGGGCGGCGCATGGCAGGGGGAAGGTGAGGGGAAGTAA
PROTEIN sequence
Length: 472
MRFRLLLSLPLLALAACKVGPDYQRPHSAMADDWLEPASTAPVSADWWRQFGDPQLTALVERALASSPDIRQAKARIAEARAMREAAQGGQMPLVTMTRDTSFNRISENGQFPVSKIPGFDPEFPLIDSGFDASWEVDTWGRASREVERARAMEQVAEWARRDAVVSLTAEVARTYVDFRLAQEQLATARTEQDAAAKLAELADMRARAGEGSRLEAEQATAQREASSAALAQAEADVAAAAYRLAALVGTPPEQLVPDLLASSGPVPTAPDSIASGIRSDLLERRPDIRRAEMELAAATAGIGVAKADLYPRFTLQGSIGLQAQSLDDLVTGESLRYLAGGFFRWPLFNFGRVRAQIRAADAKADGAAASYEAAIVKALSESEGAANRFAASARSGTNAASSLEREDRAFTLARLLFDKGETNRLQLEQARLRLAQSQRQDAQARAGKAGAAIALYKALGGAWQGEGEGK*