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scnpilot_p_inoc_scaffold_2517

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2517_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(492..1907)
DNA (1416bp) protein (472aa)
RND transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C8E rbh
Outer membrane protein OprM {ECO:0000313|EMBL:AKH44193.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alt
RND transporter
scnpilot_p_inoc_scaffold_2517_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1912..3003)
DNA (1092bp) protein (364aa)
Putative ABC transporter permease protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB3_9SPHN rbh
Inner membrane transport permease YbhR {ECO:0000313|EMBL:AKH44194.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;"
membrane protein
scnpilot_p_inoc_scaffold_2517_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3003..4181)
DNA (1179bp) protein (393aa)
Putative ABC transporter permease protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB4_9SPHN rbh
Inner membrane transport permease YbhS {ECO:0000313|EMBL:AKH44195.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;"
putative ABC transporter permease
scnpilot_p_inoc_scaffold_2517_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4178..5962)
DNA (1785bp) protein (595aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB5_9SPHN rbh
Putative ABC transporter ATP-binding protein YbhF {ECO:0000313|EMBL:AKH44196.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythr
multidrug ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_2517_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5986..6975)
DNA (990bp) protein (330aa)
HlyD family secretion protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB6_9SPHN rbh
Multidrug resistance protein MdtN {ECO:0000313|EMBL:AKH44197.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc
secretion protein HlyD
scnpilot_p_inoc_scaffold_2517_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7377..7904)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQB0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43792.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_2517_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8484..9227
DNA (744bp) protein (248aa)
Cell division ATP-binding protein FtsE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBI6_9SPHN rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:GAD50826.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
cell division ATP-binding protein FtsE
scnpilot_p_inoc_scaffold_2517_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9224..10120
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7G2_ERYLH rbh
Cell division ABC transporter subunit FtsX {ECO:0000313|EMBL:AKH43794.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_2517_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10131..10661
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZN1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43795.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_2517_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10667..11350
DNA (684bp) protein (228aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7W5_9SPHN rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:GAD50823.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
phospholipid/glycerol acyltransferase
scnpilot_p_inoc_scaffold_2517_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11347..12615
DNA (1269bp) protein (423aa)
iron transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A64 rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:KHS47033.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
natural resistance-associated macrophage protein
scnpilot_p_inoc_scaffold_2517_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12632..13558)
DNA (927bp) protein (309aa)
cyclohexadienyl dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGP4_9SPHN rbh
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:AKH43797.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="A
scnpilot_p_inoc_scaffold_2517_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13555..14685)
DNA (1131bp) protein (377aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBI3_9SPHN rbh
scnpilot_p_inoc_scaffold_2517_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14758..15861
DNA (1104bp) protein (368aa)
Homoserine O-acetyltransferase {ECO:0000313|EMBL:AKH43799.1}; EC=2.3.1.31 {ECO:0000313|EMBL:AKH43799.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythr
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7G7_ERYLH rbh
scnpilot_p_inoc_scaffold_2517_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15858..16448
DNA (591bp) protein (197aa)
Methionine biosynthesis protein MetW n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7W1_9SPHN rbh
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:GAD50818.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
methionine biosynthesis protein MetW
scnpilot_p_inoc_scaffold_2517_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..17233)
DNA (762bp) protein (254aa)
Protein fdhD homolog n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTC3_9SPHN rbh
Formate dehydrogenase accessory protein {ECO:0000313|EMBL:AKH43801.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;"
formate dehydrogenase accessory protein FdhD
scnpilot_p_inoc_scaffold_2517_17
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17257..17484)
DNA (228bp) protein (76aa)
formate dehydrogenase subunit delta (EC:1.2.1.2)
Putative NAD-dependent formate dehydrogenase delta subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJK7_9SPHN
NADH-dependent formate dehydrogenase delta subunit FdsD {ECO:0000313|EMBL:AKH43802.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alter
scnpilot_p_inoc_scaffold_2517_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17481..19901)
DNA (2421bp) protein (807aa)
Putative NAD-dependent formate dehydrogenase alpha subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y656_9SPHN
Putative NAD-dependent formate dehydrogenase alpha subunit {ECO:0000313|EMBL:GAD48636.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
formate dehydrogenase subunit alpha
Displaying 18 items

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