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scnpilot_p_inoc_scaffold_2517_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(5986..6975)

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 328.0
  • Bit_score: 390
  • Evalue 1.40e-105
  • rbh
Multidrug resistance protein MdtN {ECO:0000313|EMBL:AKH44197.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 326.0
  • Bit_score: 437
  • Evalue 1.40e-119
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 328.0
  • Bit_score: 394
  • Evalue 2.20e-107

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAACGGGAAGCGTATCCTCGCCCTTGCCGGCGCCGCCATCGTGCTGATCGCCGCTGTCGCCACCAATGGCTTCGGGCTGATCGGCCGGGGCCATGATGGAGAGCTGACGCTCTATGGCAATGTCGACATTCGCGAAGTGGACATGGCCTTCCGCGTGGCCGGGCGAATCGCCGCGGTCGATGTGGACGAGGGGGACAAGGTCGAGCCGGGCCAGCTTCTCGCTCTGGTCGATCCCGCCCCGCTCGACAGCAGGATCGCGGAATCCGATGCCATGATCGCGCAGGCCCGCGCCCAGCTGGCTGAGCTGATGAATGGCAGCCGCTCGCAGGATAAGGGGCAGGCCCGCGCCCAGGTGGAAGCCGCGCGGGTGGCCCTGCGCAAGGCCCAGCAGGATGTGGATCGCCGCCAGTCGCTGGTGGAGCCCGGCGCGATCAGCCGCGACGTGTGGCAGGCCACTGTGGCCCAGCGCGATCAGGCGCAGGCCCAGCTTACCGAAGCGCAGCAGGTGCTTTCCAAACTGGATCAGGGCGCGCGCAGCGAACAGATCGATGCGGCCAAGGCCCAGCTAAAGAGCGCCATGGCCGCGCGCGGCAGCCTGATGGTGGACCGGGGCGACACGGCCCTGCGCGCCGCCACTGCCGGAACGGTCGTCACCCGCGCGCAGGAACCGGGCGCCATCGTCCAGCCGGGGCAGACCGTGCTGACCCTGTCCATCGATCGGCCCCTGCGTGTGCGCGCCTATGTGGCGGAAACCGACCTGTCGCGCGTGGCGCCCGGCATGAAGGTGCAGGTGAAGGCGGACGGGAACGACAAGACCTATCACGGCACGATCGGCTTCATTTCTCCGCGCGCCGAATTCACGCCCAAGACCGTGCAGACAGAGGATTTGCGCACCGATCTGGTCTATCGCATGCGCATCACGGTGTCGGACCCGGATGACAGGCTGCGGCAGGGCCAGCCGGTAACGATAGTGGTTCTGGGCAAGTAG
PROTEIN sequence
Length: 330
MNGKRILALAGAAIVLIAAVATNGFGLIGRGHDGELTLYGNVDIREVDMAFRVAGRIAAVDVDEGDKVEPGQLLALVDPAPLDSRIAESDAMIAQARAQLAELMNGSRSQDKGQARAQVEAARVALRKAQQDVDRRQSLVEPGAISRDVWQATVAQRDQAQAQLTEAQQVLSKLDQGARSEQIDAAKAQLKSAMAARGSLMVDRGDTALRAATAGTVVTRAQEPGAIVQPGQTVLTLSIDRPLRVRAYVAETDLSRVAPGMKVQVKADGNDKTYHGTIGFISPRAEFTPKTVQTEDLRTDLVYRMRITVSDPDDRLRQGQPVTIVVLGK*