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scnpilot_p_inoc_scaffold_4075_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(260..1303)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3C9B3 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 346.0
  • Bit_score: 281
  • Evalue 1.30e-72
Uncharacterized protein {ECO:0000313|EMBL:EQB32655.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 344.0
  • Bit_score: 278
  • Evalue 1.50e-71
LacI-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 343.0
  • Bit_score: 274
  • Evalue 4.50e-71

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Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGGCGACCGAGAAACGCCGCCCCACCATTATCGACATTGCCCGCAAGGCGGAGGTTTCGTTCAAGACCGTTTCGCGCGTGCTGAACGAAAATCCGCGCGTGGCTGCCGAACTGCGCAGCCGCGTGCTCAAGGCCATGGCGGAACTGGATTACCAGCCCAATCTTGCTGCGCGCTCGCTGGCCGGGCGGCGGGGCTATGCCATTGCGCTGTTGGTGGACGGGTCCGAATTCTTCCGGGAAGACGATGCCAATGCCTATTTCTCGCCCTATCTGGTCGATCTTCAGGCCGGCGCGCTGATCGCCTGCCGCGAACAGGGCTATCACTTTTTTGTCGAACCCTATGATTTCTCGGTGGAAGGCTGGGAAGGCGGGCTGCGCGCCCAATTGTCGCGCATTGCGCTGGACGGGGTCATGCTCGCCCCGCCTTCGGCCGACCGCCTGCCGCTGCTCGATGCGCTGGACGATCTGAACATCCCCTATATCCGTTTTGCGCCGGGGCTGGAACCGGGGCGCTCCCCCAGCGTGGCGAGTGACGAGGATGGCGGCGCGCGCGCCATGGCGGAGCATCTGCTGGCGCTGGGCCATCGCCGCATCGGGCTGATCGGCGGGCCGAAGGACCACATCGCCGCCGCCGTCCGCGTGGTCGCGTTTCAGGAAGCGGTGGCTGGCCGGGCCGAAGTGATCTTCCAACCCGGCGATTTCACCTTCGAAGGCGGGCTGGCCGCTGGAGATGCGCTGCTGGCAGAGGACGACCGCCCAAGTGCCATCTTCGCCACCAACGACTTCATGGCGGCCGGGGTTGTGACGGCGGCGATCCGTCGTGGGCTGAAAGTGCCGGAGGATGTCTCCATCGGCGGCTTCGACGATTCCGCCGTAGTCCGCTTCCTCTGGCCCCCGCTCACCACGGTGCGCCAGCCAATCCGCAAGATGGCGGCGGCGGCAGTGGACTATCTTGTCGCACAGGCGAGCGGCCGGGAACTGCCGGAGCGGGCGGTTGAACTGGCGAGCGAACTGGTAGTCCGGGGATCGACGGGGGCGGTTTAA
PROTEIN sequence
Length: 348
MATEKRRPTIIDIARKAEVSFKTVSRVLNENPRVAAELRSRVLKAMAELDYQPNLAARSLAGRRGYAIALLVDGSEFFREDDANAYFSPYLVDLQAGALIACREQGYHFFVEPYDFSVEGWEGGLRAQLSRIALDGVMLAPPSADRLPLLDALDDLNIPYIRFAPGLEPGRSPSVASDEDGGARAMAEHLLALGHRRIGLIGGPKDHIAAAVRVVAFQEAVAGRAEVIFQPGDFTFEGGLAAGDALLAEDDRPSAIFATNDFMAAGVVTAAIRRGLKVPEDVSIGGFDDSAVVRFLWPPLTTVRQPIRKMAAAAVDYLVAQASGRELPERAVELASELVVRGSTGAV*