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scnpilot_p_inoc_scaffold_6086_7

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 5064..5813

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 246.0
  • Bit_score: 423
  • Evalue 1.60e-115
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 248.0
  • Bit_score: 417
  • Evalue 3.10e-114
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4W0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 246.0
  • Bit_score: 423
  • Evalue 1.20e-115
  • rbh

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGACCCGTTACGCCCTCACCATCGAATTCGACGGCACGCCCTTCATGGGCCTCCAGCGGCAGGCGCATGGCCCCAGCGTGCAGCAGACCGTGGAAGAGGCTGTGCGGCAGGTGACTGGCGAAGCGGCCACGCTCCATTCGTCAGGCCGCACCGATGCGGGTGTCCATGCGCTGGCCATGCGCAGCCATGTGGACATCGCCAAGCCCTTCACACCATTCCGCCTGATGGAGGCGCTCAACGCGCTGATGCGCCCTGCCCCGGTCGCAGTGATCGACTGCGAGGTGGTTCCGGATGACTGGCACGCGCGCTTTTCCTGCATCGGCCGGTCCTATCTCTATCGCATCGTCAACCGCCGGGCCCCGCTGACGCTGGAGAAGAACCGCGCCTGGCATGTCGCCCGCCCGCTGGATGCCGAGGCGATGCACAGGGCCGCGCAGCATCTGGTTGGCCTGCATGATTTCACTACCTTCCGCTCGGTCCATTGCCAGGCAAAAGACCCGGTAAAGACGCTGGACCGGCTGGACGTGCGCCGCGAGGGCGATCTGGTGCTGATCGAGGCGGCCGCGCGCAGTTTCCTGCATCATCAGGTCCGCTCCATGGTCGGCACGCTGGCGCTGGTTGGGCTTGGCCAGTGGAGCGAGGATCAGGTGGCGCAGGCCCTTGCCGCCCGGGAACGGCAGGCGCTGGGCCTCAATGCCCCGCCAGACGGGCTCTATTTCGTCCGCGCCTTCTACCCCGGCGAGGACTGA
PROTEIN sequence
Length: 250
MTRYALTIEFDGTPFMGLQRQAHGPSVQQTVEEAVRQVTGEAATLHSSGRTDAGVHALAMRSHVDIAKPFTPFRLMEALNALMRPAPVAVIDCEVVPDDWHARFSCIGRSYLYRIVNRRAPLTLEKNRAWHVARPLDAEAMHRAAQHLVGLHDFTTFRSVHCQAKDPVKTLDRLDVRREGDLVLIEAAARSFLHHQVRSMVGTLALVGLGQWSEDQVAQALAARERQALGLNAPPDGLYFVRAFYPGED*