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scnpilot_p_inoc_scaffold_6086

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6086_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1097
DNA (1095bp) protein (365aa)
Formate--tetrahydrofolate ligase {ECO:0000313|EMBL:AKH42053.1}; EC=6.3.4.3 {ECO:0000313|EMBL:AKH42053.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth
Formate--tetrahydrofolate ligase n=1 Tax=Sagittula stellata E-37 RepID=A3JY21_9RHOB
fhs; formate-tetrahydrofolate ligase
scnpilot_p_inoc_scaffold_6086_2
unknown

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1291..1800
DNA (510bp) protein (170aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_6086_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1903..2703)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P4N3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX57172.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
phytanoyl-CoA dioxygenase
scnpilot_p_inoc_scaffold_6086_4
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2845..3414)
DNA (570bp) protein (190aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A048_9SPHN
scnpilot_p_inoc_scaffold_6086_5
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3497..4093)
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Novosphingobium RepID=F6IFV4_9SPHN rbh
recombinase RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
scnpilot_p_inoc_scaffold_6086_6
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4147..5064
DNA (918bp) protein (306aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=158500 species="B
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKA2_9SPHN
scnpilot_p_inoc_scaffold_6086_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5064..5813
DNA (750bp) protein (250aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A (EC:5.4.99.12) rbh
tRNA pseudouridine synthase A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4W0_9SPHN rbh
scnpilot_p_inoc_scaffold_6086_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5823..6632)
DNA (810bp) protein (270aa)
Penicillin-binding protein 1A n=1 Tax=Sphingomonas sp. LH128 RepID=J8VRB4_9SPHN
Penicillin-binding protein 2D {ECO:0000313|EMBL:AKH42061.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="A
penicillin-binding protein, 1A family protein
Displaying 8 items

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